Phascolarctos cinereus (koala): 110198387
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Entry
110198387 CDS
T05867
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110198387 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110198387 (DHX8)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110198387 (DHX8)
Spliceosome [BR:
pcw03041
]
Complex C
Other components
Step II factors
110198387 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
TsaE
PhoH
Transformer
Sigma54_activ_2
ABC_tran
Presenilin
Motif
Other DBs
NCBI-GeneID:
110198387
NCBI-ProteinID:
XP_020828287
UniProt:
A0A6P5J1P5
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MAEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKASLTK
NGAEFTDSLISNLLRLIQTMRPPAKPSANKDPVVKPKTEKEKLKDLFPALCRPDNPAIRT
MLDEDDMKVAVDVLKELEALMPSAAAHEKQRGSEHRDRAKKKKRSRSRSRDREHKRRHRS
RSRSRSRTRDRNKGKSRYRSRSRSQSPVKDRKDRDKYGEKNNDRWRDKHVDRPPPEEPSI
GDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVL
SFTGTKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDD
TLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEE
EPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMG
LNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRES
LPIFKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAM
SVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIML
DEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPV
EILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDV
PELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV
YNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTN
LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFP
LEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLT
LLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQ
KAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMRE
VTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccaggacccgccgaagagctcgccaagctcgagtacctgtcccttgtgtcc
aaagtgtgcaccgagctggacaatcacctggggatcaacgacaaggacctggctgaattt
gtgatcaatcttgctgagaaaaatacaacctttgacacttttaaagcttccctaaccaaa
aatggtgctgaattcacagactctcttataagcaatttattacgtctcatacagaccatg
cggcccccagcaaaaccttctgctaacaaagatccagttgttaaaccaaagacagaaaag
gagaagcttaaggacctgttcccagcactttgccgaccagacaatcctgcaatccggacc
atgcttgatgaagatgatatgaaagtagctgtggatgtcctgaaagagttagaagctctg
atgcctagtgctgccgcgcatgagaagcagagaggctctgaacaccgtgatagggctaaa
aagaagaaacggagtcggagtcgaagccgagacagagaacacaaacggaggcaccggtcc
cgatcaaggtcacgttctagaactcgagataggaataaagggaaatctagataccgatct
aggagcagaagtcaaagtcctgtcaaagaccgtaaggaccgtgataagtatggggagaag
aataatgacagatggcgagacaaacatgtggaccgccctcctcctgaagagccttctatt
ggggacatttacaatggcaaagttaccagtatcatgcagtttgggtgttttgtacagctg
gagggactaaggaaacggtgggaaggtttagttcacatctctgagcttcgtcgggaaggt
cgtgtagccaatgtcgctgatgttgtgagcaaaggccagagggttaaagtgaaagtcctg
tcattcactgggaccaaaaccagcctgagcatgaaggatgtagatcaggatactggagaa
gatctgaacccaaaccgacggaggaaccttgttggggagaccaatgaggagacctctatg
aggaaccctgatagacctactcacctctccctcgtcagtgccccagaagtagaagatgac
actcttgaaaggaaacgcctgactcgaatctcagatcctgagaaatgggagatcaaacag
atgattgcagccaatgtactttccaaagaagagtttccagactttgatgaagagacagga
atccttcctaaagtagatgatgaagaagatgaagacttggagattgaactggttgaggaa
gaacctccattcctgagagggcacaccaaacaaagcatggacatgagccccattaaaatt
gtcaagaatcctgatggctccctgtcccaagcagcaatgatgcagagtgctttggccaaa
gaaaggagagagctcaaacaggcccagcgggaagcagagatggactccatccctatggga
ctcaataaacactgggtggatcctctgcctgatgtggatgggaggcaaattgctgccaac
atgcggggcattggaatgatgcccaatgatatccccgaatggaagaagcacgcttttggg
ggcaacaaagcatcttatggtaaaaagacccagctctcaatcatcgagcaaagggaaagt
ctccctatcttcaaacttaaagaacagcttgttcaggctgttcatgacaatcagattctg
attgttattggagagacaggttctgggaagacaacacaaatcacgcagtaccttgctgag
gcaggttacacatccagggggaaaattggatgtacacaacctcgaagggtcgcagcgatg
tcagtggccaaaagagtgtctgaggagtttggttgttgcttgggacaagaggtgggttac
actattcgttttgaagattgcaccagtccagaaacagtcatcaagtacatgacagatggg
atgttgctcagggagtgtttgattgacccagaccttactcagtatgcaatcatcatgttg
gatgaagctcacgagagaacaattcacacagatgtgctctttggattgttgaaaaagacg
gtgcagaaacggcaagacatgaagctgattgttacctctgccacattagatgctgtgaaa
ttttcccagtatttctacgaagctcccattttcaccattccaggccgaacatatccagtg
gaaattctctacactaaagaacctgaaacagattacttggatgccagcttgattacagtc
atgcagatccatttaactgaaccaccaggtgacatcctggtgtttctgactggtcaggaa
gagattgatactgcctgtgagattttgtatgaacgcatgaaatctctgggtcctgatgta
cctgaattaatcatcctccctgtgtattctgctttaccgagtgagatgcagacccggatc
tttgacccggctcctccgggtagcaggaaggttgtaattgctaccaacattgctgagaca
tctctgactattgacggaatctactatgtggtggaccctgggtttgtgaagcagaaagtg
tacaactccaagactgggatcgaccagctggtggtgactcccatctctcaggcacaggca
aagcagagagcaggcagagctgggagaacagggcccggaaagtgttacaggctttataca
gagcgtgcctaccgagatgaaatgctgaccaccaacgtgcctgagatccagaggactaat
ttagccagcacggtgctctctctcaaggccatgggtatcaacgacctgctttcctttgac
ttcatggatgcccccccaatggaaactctgattacagccatggagcagctgtacacatta
ggagccctggatgatgagggcctgctcacccgtctgggccgtaggatggcagagtttccc
ttggagccaatgttgtgcaagatgctgatcatgtccgtgcatttgggctgtagtgaggag
atgctcaccatcgtgtccatgttgtcagtgcagaatgtcttctacaggcccaaggacaaa
caagcccttgcagatcagaagaaagccaaattccaccagactgaaggtgaccacctcact
ctcttggctgtgtacaattcttggaaaaacaacaaattctctaacccctggtgttatgag
aatttcatacaggctcgctccttgcgccgagcccaggacattcgtaaacagatgttgggc
atcatggataggcataaactggatgtggtatcctgtggcaaggctacagtccgtgtacag
aaagccatttgcagtggtttcttccgaaatgctgccaagaaggacccacaggagggctat
cgaactttgattgaccagcaggtggtctacatccatccctccagcgctctcttcaacagg
cagccagaatgggtggtataccatgagctggtgctgaccaccaaagagtacatgcgggag
gtcaccaccattgacccccggtggctggtggagtttgccccagccttcttcaaggtctcg
gatcccacgaagctcagcaagcagaagaagcagcagcggttggagcccctgtacaaccgc
tatgaggagccgaatgcttggaggatctcccgtgctttccggcggcggtga
DBGET
integrated database retrieval system
