Phascolarctos cinereus (koala): 110205665
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Entry
110205665 CDS
T05867
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110205665 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110205665 (TDG)
Enzymes [BR:
pcw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
110205665 (TDG)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110205665 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
110205665
NCBI-ProteinID:
XP_020838033
UniProt:
A0A6P5JYX1
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MEFEDLSRYSFEQIQAFYQFPYYPMMAAAPSMEFMNEQLALPEIPVPTFDPEPVQEEKGR
KRRTRSSEPKQPEPKKRAGSPRAAKSAKSKGKQEKITDTFKVKRKVDRFNGMSEAELLTK
TLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLP
GKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEV
FGVKVKKLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
VPNSDVQEVQYTFNLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCEKACDVETPCPFSSL
DVTGTNNAALSVEPTFGDIVGDQWLTQSFTDQLLPSFSPFGSFEQEGGCV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggacctgagcagatattcttttgagcaaattcaagcattttaccagttt
ccgtactacccaatgatggctgcagctcccagcatggaatttatgaatgaacagctagct
ctaccggaaattccagtcccaaccttcgacccggagcctgttcaagaagaaaaggggaga
aaaagaagaaccagatcatcggagccaaagcagccagagccgaaaaaacgtgctggatcc
cctagagcagccaagtcagcaaaatccaaggggaaacaagaaaaaattacagatactttc
aaagtcaaaaggaaagtggatcgttttaatgggatgtcagaagctgagcttctgactaag
accctgcctgatattttgaccttcaacctggacattgtcattattggcataaacccagga
ctcatggcagcttacaaagggcatcattacccaggacctggaaaccatttttggaagtgt
ctctttatgtctggactgagtgaagtccagttaaatcatatggatgaccatactttacca
ggaaagtatggtatcggctttacaaatatggttgaaaggaccaccccaggcagcaaggat
ctttcaagtaaagagtttcgagaaggagggcgcattttggtgcagaaattacagaaatac
caacctcgaatcgcggttttcaatggaaaatgtatttatgaaatttttagcaaagaagtt
tttggagtaaaagttaagaagctggagtttggacttcagccccataaggtcccggataca
gaaactctctgctacgtcatgccatcgtccagcgcgaggtgtgcccagttcccacgggcc
caagataaagttcattattacatcaaactgaaggatttgagagaccagttgaaaggcatc
gtacctaactcggacgtgcaggaggtgcagtacacattcaacttgcagcttgcccaagag
gatgcaaagaagatggctgttaaggaagaaaagtatgatccgggctacgaggcagcgtat
ggaggtgcttactgtgaaaaggcgtgtgacgttgagactccgtgtcccttctcctctttg
gacgtgacaggaacaaataatgcagccttaagtgtagagccgacctttggggatattgtg
ggtgatcagtggctgacgcagtcattcacagaccagcttctgccttccttcagccccttt
gggagcttcgagcaggagggcggctgtgtgtga
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