Phascolarctos cinereus (koala): 110216628
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Entry
110216628 CDS
T05867
Symbol
BDP1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110216628 (BDP1)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110216628 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110216628
NCBI-ProteinID:
XP_020854144
UniProt:
A0A6P5LBP0
LinkDB
All DBs
Position
Unknown
AA seq
2612 aa
AA seq
DB search
MFRRARLSVKPNVRPGAGGRGPAAPEPPRGQQAPREPEPADPPPLPPAPEAAETPPGPPL
DPGGAEPPEDEAAEYGDETPAGNDAGQSSKSSPAVLQRRKRISTVPSPAKPSAPSPSVPQ
DLCTVQQEAPQPSPLPAKEKQPCSDRYRILKAQKLREMLREEMTKRRKQWKNKYAGNESQ
MPPDRSKMTMRDLIYYLPDSNPMKSSLEQEAKTEKSTPPVQTKDQEEKNIPDAEDDVEEM
EEESNDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSF
RKNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKANGWRIDK
AFQEKRPFDFDFFARLLEKVLAEEEKRKQKTVKNQNTKEKKSSRPRKKQNVNRVASGEVD
DDPDESLNARLSDMKGTEMGAEIVEKENDQSLNIAGQTILESVVNRKKRKRKKKDDIDEQ
EAENVSKEATDPSDSSKGEKPSKKKCQLLVTVINGDECNKGLEVSNLENLDEIACIPPSK
NVENETEHISSASNQDVNAASVAAVESSEPEALDLSPSKARSKELTQIVQVDSSVGGKIG
DTTIKLLEAEKADTSKPKVRGRPLRPKPNLLRPFGKKVESTENKIEMETKNSFPELPGNV
EKSHMEKDECGPPDIPGKEVAETESQGPEAESHENHGLQETDKASTFRPPRLMRGRMQRP
KPHIRRTAGQKEVLAAEDKTGTKEEEESESSVAKGAQVQTEDKSFNKLDVGDSSSKSEKE
DVIFQKSKADELETVKENQSLQDDNKSDTLKQGPVMRTRFQKPRPNIXRASGRGEISTGE
KAPKEISVTGKIEASLLQTDDEFSSLPLPDIISCGVPPPVEAFEKEAPSQKGISSPVIPL
KPSCMSPVEECEEDKERQSTTDLEQVSHIIESRCSQDEKLSVVKKTPFVRSRFKRPRPNL
GRAIEKSGVPGAEKCELVETGKLEIMIQHDSKQDAISPPQDDAFLLQENVSIFQVNSSPC
QEDSFPPQVTSSSPQVDASSPKNDSVLDQGDAMPPQVPTSPTQLDTFPLQDSASPPQVSV
FPLQHDISSLQDDASPLQGEASALQGEAFLLRDSASSLQDNGSPVQGESSPLQGESFHLR
DSASPLQGDASPLQGDASRIQGNAYPLQGHASPLQVKAFPLQDDASPFKDEASPLQYEAS
PLQDEASPLQDEACLLKNEASLFQDEASPLQDEASPLQDESSPLQDEASPLQDKASPFQD
EASPLQSEASLLQGDASSLQVDASLLQSEAFLLQGSASPLQDDASPLKGNASFLQDEVSS
LQGEVFPLQGDVSPLQGEVSPLQSEASSLQSDVCSQDSASPPQVGAFPAQVYASPPQLAA
SSLQVVGSSHQDDASVPQDDVSPPQMAASPTKNDVTPFQVDVSPLQVDVSTLQYNTSPLP
VATSSLQVSASPIQVITFPXEDDAQVTASCPQGAALPIQDISHPCQNDATECSQKTVVKY
EKPVPAKEEADLLLNEQTPKKHLDSMSCAPEERSSFIEAQESDCAVSMGVENSQQDIKKN
DIQPVQRTRCRFKKPRPNISKAERRGSRAAGKWVIEEKDKEEGIIQHKNESESEFFTIPN
FKIESEVVPSEAHSMCGSKNQGVSEQNLQISRTEILNEPISKDKHKPHAISPAQLRRSRF
QTAKPNLGRVYRRKEEPGTEKIVPDKNDTRKAEDKLLQQGDSDTHQSLKDKTELLSSLGI
AARKECVDSRDSALPKEYSQSEKLDSFDRQLDYAGHSGPGATSSSIGVEEQFLNKSTRYT
QQSKEPGCLKNTLGRRIVTSSASECEMDNTDRRMQRKCKQNFTKGRGAKRVRGRISKKEP
KTSKAVLVTLRASQEEDEEDTEDLESEYEEENYHLAPEEVNKAPVFVPVGLRSPEPVSAQ
IEETMEELEISVNVPDVPCITITEHLLPDINVSNEGLNREQNSNASVEIATIGYPEEETG
VNDGSTEAAIALLTMGNQMLQSETSTEGIVCVLPEDDLRSHISTSNPETSDHKVLLEHQV
LSSPVSSTLLSILDENKSILEEQNTGKEMNIPGQIKENSTPSSDLSSKKTSSLRTRSRFP
KPKPNLSKILGKDRHVRRKVTSLPGTMNQQVEIHSETECIASKGAVLEDTNLESKIIADG
LMQASMLTDLHSFEGTDDGKEVKQIEREENQDKESQESQVVPPTPLAKTISDDMSGNLTK
TPTGEFPSHSDDGHNLLMTHFTQQCMLNNAAEVEQQNVSIPDGIAVNLVADEHQGEEEQT
FILTLVEIPTDSVEQFAGLSDSLTSGPLLPAPILVKPMNKEQRGDLSYGNSMQPSSEKPP
TDLDLTFSETFGHSLEESTSLIAPTNVNVSTLGEDCQKITSEVSSEESTDVYKNATGESY
EKQTVVPVLGSTSIIAEPQKTEKEQSEPSVQASGPESCEEVTCTQKEENVPHLPPDESVV
SDKQERSGASHQLEQRSKSSSLFSRPGRRPLGFLSLICSENNLESEEATLMNSQKRLKPI
IPVSRHNFRRPAQLNESKRKKQDSCPLPPTSAESPSEASTVSSSTPQVSCDQSFEEEKCK
SDQKVETEEEPTKVTEYFFSDIFMEVDETEQN
NT seq
7839 nt
NT seq
+upstream
nt +downstream
nt
atgttccggagggcgcgactcagcgtaaagcccaacgtgagacccggggctggcggcagg
ggcccggccgctcccgagccgccgcgcggccagcaggctccccgagagcccgagccggcc
gacccgccgccgctgccgccagcgcccgaagcagccgagaccccgccggggcccccgctg
gatcccgggggagccgagcccccggaggacgaggcggccgagtatggtgatgaaacacct
gctgggaatgatgctggacaatccagtaaatcttcaccggctgttttacaaagaagaaag
cgaatatcaactgtgcctagtcctgctaaacctagtgccccttctccatcagttccccag
gacttgtgcactgttcaacaggaagcacctcaaccaagtccccttccagcaaaagagaag
cagccatgctcagatcgttataggatactcaaagctcaaaagctgagagaaatgctaaga
gaggaaatgacaaaaagaaggaagcaatggaaaaacaaatatgctggaaatgaaagccaa
atgccaccagaccgttctaaaatgactatgagagacttgatatattacctgccggacagc
aatcctatgaaatcttctttggaacaagaagcaaaaactgaaaaatctacaccaccagtg
caaaccaaagatcaagaagagaaaaatattcctgatgctgaagatgatgttgaagaaatg
gaggaagagagcaacgatggccctttacttgttcctcgtgttaaagtggcagaagatggc
tctattattctggatgaagaaagtttaactgtagaagttttaaggacaaaaggcccttgt
gttgttgaagaaaatgatcccatttttgaaagaggttccactactacatattccagcttt
aggaaaaattattactctaaaccatggtcaaataaagaaacagacatgttctttttagcc
atcagcatggtaggaacagacttttccatgattggccaactctttcctcacagagcaaga
atagaaattaagaataaatttaaacgtgaggaaaaagcaaatgggtggagaattgacaaa
gcatttcaagagaaacgcccctttgatttcgatttctttgctcgtttgcttgagaaggtc
cttgcagaagaggagaaaagaaaacagaaaactgttaaaaatcaaaacacaaaagagaag
aagtcttctagacctcgaaaaaagcaaaatgtaaatagagttgccagtggtgaagtagat
gatgatccagatgagtctctgaatgctagactttcagacatgaaaggaaccgaaatgggt
gctgagattgtcgagaaagagaatgaccaatctttgaatatagcaggacagactatatta
gagtctgttgtaaacagaaagaaacggaaaaggaagaaaaaggatgacattgatgagcaa
gaagcagaaaatgtttcaaaagaggccactgacccctcagacagttctaaaggagaaaag
ccaagtaagaagaaatgtcagcttttggtaactgtaataaatggggatgaatgtaacaaa
ggcttggaagtttccaatttagaaaacctagatgagattgcttgcataccaccaagtaaa
aatgttgagaatgaaactgaacacatctcttcagcaagtaatcaagatgttaatgccgca
tcagtagcagcagttgaatcttctgaaccagaggctttagatttgtctccctcaaaagcc
agaagtaaagaattgactcagattgttcaagttgacagcagcgtaggaggaaaaattggt
gatactactattaaactcctggaagctgaaaaagctgatactagcaaacccaaagtgaga
ggacgtcccctcaggcctaaacccaacttgttaagaccatttggaaagaaagtagaatct
actgaaaataaaattgaaatggagactaaaaattcatttccagaacttccaggaaatgtt
gaaaagagtcacatggaaaaagatgaatgtggccctcctgatattcctggaaaggaagtc
gcagaaacagagagtcaaggacctgaagctgaatctcatgaaaaccatggtttacaagaa
actgataaggcaagtactttcagaccaccgaggttaatgaggggtcgaatgcagagacca
aagccacatatcaggagaacagctggccagaaagaagtattagcagcagaagacaaaacc
ggaactaaggaagaggaggaaagtgagtccagcgtcgccaaaggtgcccaagtacaaaca
gaagataagtcatttaacaagttagatgttggggacagtagttcaaagagtgaaaaagaa
gatgtaatttttcagaagtcaaaagcagatgagcttgagactgttaaggaaaatcagagt
ctgcaagatgacaataaatcagatacactcaaacaaggaccagtaatgagaacacgattt
cagaagccaagacctaacatangaagagcaagtggaagaggcgaaattagcacaggggaa
aaggcacccaaggaaataagtgtcactggaaaaatagaggcgagtttgcttcaaactgat
gatgaattcagttctcttcccctcccagatattataagctgtggagtgccaccccctgtt
gaagcatttgaaaaagaagcaccttctcaaaagggaatctcaagtccagtaattcctctg
aagccttcttgcatgtcacctgtagaagagtgtgaagaagataaggaaagacaatctaca
actgatctggagcaggtttcacatattattgaaagcagatgttctcaagatgaaaagctc
tctgtagttaaaaaaacaccttttgtgagaagtcgattcaagagaccaagaccaaactta
ggaagagcaattgaaaaaagtggtgttccaggagcagaaaaatgtgagttagtggaaaca
ggaaaattggagattatgatacaacatgatagtaaacaagatgccatctccccccctcaa
gatgatgcctttctccttcaagaaaatgtttctatctttcaagttaattcttccccctgt
caagaagattccttcccacctcaagtcacttcctcttctccccaagttgatgcctcatcc
cctaaaaatgattctgttcttgatcaaggtgatgccatgccccctcaagtccctacctcc
cccacccaactcgataccttcccacttcaagacagtgcttctccccctcaagtcagtgtc
tttcctcttcaacatgacatttcgtcccttcaagatgatgcctctccccttcaaggggaa
gcctctgcccttcaaggtgaagccttcctccttcgagacagtgcttcctcccttcaagac
aatggctccccagttcaaggtgaatcctccccccttcaaggtgaatccttccaccttcga
gacagtgcctccccccttcaaggtgatgcctccccccttcaaggtgatgcctcccgcatt
caaggcaatgcctacccccttcaaggccatgcctccccacttcaagttaaagctttcccc
cttcaagatgatgcttccccctttaaagatgaggcctccccccttcaatatgaggcctct
ccccttcaagatgaggcctccccccttcaagatgaggcctgcctccttaaaaatgaggcc
tccctctttcaagacgaggcctccccccttcaagatgaggcctccccccttcaagatgag
tcctccccccttcaagatgaggcctcaccccttcaagataaggcctctccctttcaagat
gaggcctcccctcttcaaagtgaagcctcccttcttcaaggtgatgcctcctcacttcaa
gttgatgcctccctacttcaaagtgaagccttccttcttcaaggtagtgcttcccccctt
caagacgatgcctctccacttaaaggcaatgcctccttccttcaagatgaggtctcctct
cttcaaggtgaggtcttccctcttcaaggtgatgtctccccacttcaaggcgaagtctcc
ccacttcaaagtgaagcctcctctcttcagagtgatgtctgttctcaagacagtgcctca
ccccctcaagttggtgcttttcctgctcaagtctatgcttcccccccccagttggctgcc
tcctcccttcaagttgttggctcctcacatcaagatgatgcctctgtccctcaagatgat
gtctctccccctcagatggctgcctctcccactaaaaatgatgtcaccccttttcaagtt
gatgtttctccccttcaagttgatgtctccactcttcaatacaatacctccccccttcca
gttgctacctcctctcttcaagtcagtgcttcccccattcaagtcattacctttcccnct
gaagatgacgcccaagtcactgcttcctgccctcaaggtgctgcccttcccattcaggac
atcagccacccttgtcagaatgatgcaactgaatgttctcaaaagacagtagttaaatat
gaaaaaccagttccagcaaaggaggaagcagacctgcttttaaatgaacagactccaaaa
aagcatttagattcaatgagttgtgcacctgaagagaggtcttcatttatagaagcccaa
gaaagtgattgtgctgtttctatgggtgttgagaattcccagcaagatattaagaaaaat
gacatccaacctgtacagcgaacaaggtgccgatttaagaagcctaggccaaacataagc
aaagcagaacggagaggatccagggcagcaggaaaatgggttattgaagaaaaagataag
gaagaaggaataatacagcataagaatgaatctgagagtgaattcttcaccattccaaat
tttaaaattgaaagtgaagttgtaccttctgaagcccatagtatgtgtggaagtaagaat
caaggggtatcagaacaaaacttgcagattagcagaactgaaattttaaatgaaccaata
agcaaggataaacataagcctcatgctatcagtccagcacagttgaggaggagccgattc
caaacagctaagccaaatttggggagggtgtacagaaggaaagaagaacctggaacagaa
aagattgtgccagataaaaatgacacaagaaaagcagaagataagttattgcagcaagga
gattctgacacccaccagtctctaaaagataaaacagagctattgtcatccctggggatt
gcagcaagaaaagaatgtgtggattcgagagactctgccttgcccaaagaatatagtcag
tcagaaaaattggattcctttgacagacagttggactacgctggtcacagtggtccagga
gctacttcctcatctataggtgttgaagagcagtttctaaataaatcaacaagatataca
caacaatcaaaagaaccaggttgtctgaaaaatactctgggtcgaagaatagttacttcc
tcagcctctgaatgtgagatggataatactgacaggagaatgcagcggaaatgtaaacaa
aatttcaccaaaggacgtggagccaagcgtgtccgtggcaggatttccaagaaggaacct
aagacctcaaaggcagtattagtgaccctccgagcttctcaagaagaggatgaagaagat
acagaagaccttgaatctgaatatgaggaagaaaactaccaccttgcaccagaagaagtc
aacaaggcaccagtgtttgtacctgtaggactccggtcaccagaacctgtttctgcccaa
attgaggaaactatggaagagcttgaaatttctgtgaatgtcccagatgtaccatgtatt
actattactgaacatctccttcctgatataaatgtgtcaaatgaaggattgaatcgggaa
caaaattcgaatgcctcggttgaaattgctacaattggatatcctgaagaagaaacaggt
gtcaatgatggaagcacagaagctgccatagctttacttacaatgggaaatcagatgttg
cagtcagagacgagtactgaaggaatagtgtgtgtgcttcctgaagatgacttaaggagc
catatttccacttctaacccagagacctctgaccacaaagtacttcttgaacatcaagtt
ctttcttcaccagtctctagtacattgctttcaatactagatgaaaataagagtatatta
gaggagcaaaatactggaaaagaaatgaacatacctgggcaaataaaggaaaattctaca
ccttccagtgatctgtcttctaaaaagacaagttcattgagaacaagaagcagatttcct
aaacctaagccaaacctcagtaaaatacttggaaaagatagacatgttcgtcggaaagtt
actagtcttcctggaactatgaatcagcaggttgaaattcacagtgaaacagaatgtata
gcttccaaaggagcagtattggaagatacaaacctagaatcaaagattattgcagatggc
ttgatgcaggctagcatgttgacagatctacacagcttcgaaggcaccgatgatggcaaa
gaagtcaaacaaatagaaagagaagaaaaccaggacaaggagtctcaagagtctcaagtg
gtacctcccactccactagccaagaccatttcagatgacatgagtggtaatctcactaag
actcccactggagaatttcctagccatagtgatgatggacacaacttattaatgactcat
tttacccagcagtgtatgttgaataatgctgcagaagttgagcagcagaatgtaagcatc
ccagatggcatagcagtgaatctggttgctgatgaacatcaaggagaagaggagcagaca
ttcattttaacactggtggaaatcccaacagactcagtagagcagtttgctggtttgtcg
gattcattaacttctggccctctactgccagcacccatattggtcaaaccaatgaataaa
gaacaaaggggagacctgagttacggaaacagtatgcagccatcctctgaaaagcctcca
actgatttggatctgacatttagtgaaacatttggtcacagccttgaagaaagcactagc
ctgattgctcctacaaatgttaatgtttctactttaggagaggattgtcagaaaatcact
tctgaggtgtcctcagaagaatccacagatgtgtacaagaatgctacaggagagtcttat
gaaaagcagacagttgtccctgtcttgggaagcacatctataattgcagaacctcagaag
acagagaaagagcagtcagaacccagtgttcaggcttcaggacctgaatcttgtgaggag
gtgacatgtactcaaaaagaagagaatgttcctcatttacctccagatgagagtgtggtg
tctgacaagcaggaaaggagtggggcttcccatcagttagaacagagaagcaagtcatcg
tctttgttttccagacccggccgaagacccctgggatttttatctttgatatgttcagag
aataatttggaatctgaagaagccacactaatgaatagtcaaaagcgtttgaaacctatt
atacctgtctcaaggcataattttagaagaccagctcaactgaatgaaagcaagagaaaa
aagcaagactcttgtcctcttccacccacaagtgctgagtctccttctgaagccagtact
gttagcagctcaacacctcaggtttcctgtgatcagtcatttgaggaagaaaagtgtaaa
agtgatcaaaaggtggaaactgaagaggaaccaaccaaagtcactgaatatttttttagt
gatatttttatggaagtggatgaaacagagcaaaactga
DBGET
integrated database retrieval system
