Plasmodium cynomolgi: PCYB_072840
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Entry
PCYB_072840 CDS
T02490
Name
(RefSeq) RNA-binding protein
KO
K13126
polyadenylate-binding protein
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03015
mRNA surveillance pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PCYB_072840
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_072840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_072840
03041 Spliceosome [BR:
pcy03041
]
PCYB_072840
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PCYB_072840
mRNA cycle factors
Stress granule specific factors
PCYB_072840
Spliceosome [BR:
pcy03041
]
Complex C
Other components
Complex C specific factors
PCYB_072840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
BRAP2
Lsm_interact
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
14692130
NCBI-ProteinID:
XP_004221729
UniProt:
K6V9D2
LinkDB
All DBs
Position
7:830599..832088
Genome browser
AA seq
414 aa
AA seq
DB search
TLEENKLYVKNIPKEITKRDLINFFCNETGFVDTRMVRDSSGKPKYFAYVEFDSKENAAN
FFGTLKESNVDKYKTFKIKGVDLYVAICNSTKIIFEEMKIFIKFVDCPADMDEVVIKKDV
SDFLAKHEVAVEEIRLLGGNPPTHGYVQLHNNEDVVKCVEDVKEGTIKNVHFTLNYSIPI
IKKKIIPDVEKIKANKEKNKKLQEEKKKEENNSTIVVKNLHFNTRMYKLKKLFEQIGEIE
KIHLSKKVSENNIKRNRGYAFITFKNISDATSALILNDSLVDGRSILVSKFLEDDSRAKH
REGSTHMGGQLHGEHDTEEQQQPPRGEKCNTNRRGNYHHVNHNVRSNHPQERRRINLNKS
GDPNVAVEKRTDQTEGEEPTPLTNDDFRKFFLNNSFLLFFFLFLIHSMFLKRFT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
acgctggaggagaacaagctatacgtgaaaaatattcccaaagaaataaccaaaagggat
ctaattaatttcttttgtaacgaaactgggtttgtagacacgaggatggtacgcgactct
tcagggaagcctaaatattttgcatacgttgaatttgatagcaaagaaaatgcagccaat
ttttttggaaccctaaaggaaagcaatgtggataagtacaaaacgtttaaaataaaagga
gtcgatctgtatgtagctatttgcaactcgactaaaattatatttgaggaaatgaagatt
tttattaagtttgttgattgtcctgcggacatggatgaggtggtgattaagaaggacgtt
tcggatttcctcgcgaagcacgaggtggccgtggaagagatccgcctcctcggaggcaac
ccacccacgcacggctacgtgcaactgcacaacaacgaagacgtagtgaaatgcgtggag
gacgtcaaggaagggaccatcaaaaatgtgcactttaccctaaattatagcatcccaata
attaaaaaaaaaatcatcccagatgtagaaaaaatcaaagcaaataaggaaaaaaataaa
aaactccaagaggaaaaaaaaaaagaggaaaataactctaccattgttgtaaaaaatttg
catttcaacacaaggatgtacaaactgaaaaagttattcgaacagatcggtgaaattgaa
aaaattcatctgagtaagaaggtatccgaaaataatattaaacggaatagaggctacgct
tttattacatttaaaaatatcagtgatgccacatctgcccttattcttaatgactctctc
gttgacgggagaagcattttggtctccaagttcctggaggatgatagtagggccaagcat
agagagggtagtacccacatgggtggacagctccatggggagcatgacacggaggaacaa
caacaacccccacgaggggaaaagtgtaacaccaataggagaggcaactaccaccatgtt
aatcacaacgtgaggagtaaccaccctcaggaaagaagaagaattaatttgaacaagtca
ggcgatccaaatgtagcagtggaaaaaagaaccgatcaaacggagggagaggaacccact
ccactaaccaacgatgacttccgaaaattttttttaaataattcattcttactttttttt
tttctttttttaattcatagtatgtttttaaaaaggtttaca
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