Plasmodium cynomolgi: PCYB_145280
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Entry
PCYB_145280 CDS
T02490
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_145280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcy03041
]
PCYB_145280
03009 Ribosome biogenesis [BR:
pcy03009
]
PCYB_145280
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCYB_145280
Spliceosome [BR:
pcy03041
]
Complex A
U1 snRNP components
U1 related factors
PCYB_145280
Complex B
PCYB_145280
Ribosome biogenesis [BR:
pcy03009
]
Eukaryotic type
Pre-60S particles
Helicases
PCYB_145280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
DUF5984
DUF6327
CMS1
Motif
Other DBs
NCBI-GeneID:
14695482
NCBI-ProteinID:
XP_004225047
UniProt:
K6V1Q5
LinkDB
All DBs
Position
14:complement(1933052..1935243)
Genome browser
AA seq
730 aa
AA seq
DB search
MKGVLGLKCVSCRVNGRVPLVSKKFLFVNVGSKSKFGSGLAGQNKKNGQVTANASKRTVF
IESNVKNAHVQEEVHKSAVASPDKEALNSYNDERTVDGETQQGDHLSLGGEDFEEYTQFD
RHDGRGKDVGENGFMHYKRREGAFNNHERGKNRQRHDIHGREQKYQSPSRYDNVEEGDEY
ARRASYSRRTSYSRNLNSQDRYAQLGENLKDIEWNKVDAKVQRQNLLQNVSEKKENISPE
QLDAELKRLNIFVNKESGVLNNLASNFSDVNFHDAIVNHLNTKFKEPTAIQKVTWPIALS
GKDLIGVAETGSGKTLAFALPCLMHILKQRERQAERENGWEQGQVAIGEESTQVENEKKE
LSHEATQEWTNEPTQGGMQGGTQGGMQGGMQSGMQDDTRRATQHSSDKYSHQGERTVYGL
ILLPTRELCMQVVDEIKVFEKELDIKSVAVYGGVPKYTQINNLKKGADIVVATPGRLLDL
LENGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNKNKQLLFFTATWPEQVRKLAY
DFSSFDPVKIQVGKSELTANKNIQQSVVVSSSVDLKKKLLDWLKENYEGNKILIFCDTKR
NCDNLCKELRYHQYNALAIHGDKEQRERDRILNNYRSDRCNILVATDVASRGLDIKNISM
VVNYDLPNTIEDYIHRIGRTGRAGQKGKAVLFFPYDYYVPQKARFARDLVKLLNKANHAV
PAELREIAGT
NT seq
2192 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgtactagggctgaagtgtgtgagttgcagggtcaacgggagggtgccgctc
gtgtcgaaaaaatttctttttgtaaatgtcggatccaaatcaaagttcgggtcgggtctg
gcaggccaaaataagaagaacgggcaggtaaccgccaacgcgtcgaagaggacagtattt
atagagagtaacgtgaagaacgcccacgtgcaggaagaagtacacaagagcgcggtcgct
tcccccgataaggaagcactaaacagctacaatgacgaacggacggtcgatggtgaaacc
caacagggtgatcacctctccctggggggggaggactttgaagaatatacccagtttgac
cgacatgatgggcgaggaaaagatgttggagaaaatggattcatgcattacaagcgtagg
gaaggcgcgtttaataaccatgagagaggaaagaacagacaaaggcatgacatccacggg
agagaacagaagtaccaatccccatcgaggtatgacaacgtggaggaaggagatgagtac
gcgaggagagcatcatactcgagaagaacatcgtactcgagaaatttaaacagtcaggat
aggtatgctcaactgggagagaatctaaaagacatcgaatggaacaaggtagatgcaaag
gtgcagaggcagaacctgcttcaaaatgttagtgaaaaaaaggaaaacatttcacctgaa
cagttagatgcagaactgaagagattgaacatttttgtgaacaaagaatcaggtgtacta
aacaatttagctagtaacttctccgatgtgaacttccacgatgctatagtgaaccacctg
aatacaaagtttaaagaaccgacagctattcagaaggttacgtggccgattgcactttcg
gggaaggacctaataggcgtagccgagacgggtagcggaaagactttagccttcgcccta
ccctgccttatgcacatcttgaagcagagggaacgtcaggcggagcgagagaacgggtgg
gagcagggccaagtagccatcggtgaggagtccacccaggtggaaaatgagaagaaggaa
ctctctcatgaggcaacccaggaatggacaaacgagcccacgcaaggtggtatgcaaggt
ggcacgcaaggtggcatgcaaggtggcatgcaaagtggcatgcaagatgatacgcgacgc
gctactcaacacagcagcgataagtattcccatcagggggaacgaactgtctacggactg
atcctcctccccacgagagagctatgcatgcaagtagtggacgaaataaaagtattcgaa
aaggagttagacatcaaaagtgtcgccgtttatggaggagtacccaagtacacacaaatt
aataacttaaagaaaggcgcagatatcgtagttgccaccccgggaagacttttagacctt
ctcgaaaacggagtgattcatttgttaagatgcatctatgttgttatagacgaagcggat
agactactagacatggggtttgaaaaacaactaaaaaaaattatgacgcaagttaataaa
aacaaacagctcctattctttacagctacgtggcctgaacaagtgagaaaacttgcatat
gatttttcatccttcgatccagtaaaaatacaagttggaaaaagcgaattaactgctaat
aaaaatatacaacaaagtgtggttgttagttcatctgtagatttgaagaagaagctgctt
gactggctgaaggagaactatgaagggaataaaattttaattttctgtgatactaaaagg
aattgcgataacttatgcaaagagcttcgataccatcagtacaacgcgctagctattcat
ggagataaagaacagcgggagagagacaggattctaaacaactacagaagtgaccgttgc
aatattttagtagctaccgacgtggcttctagagggctagatataaaaaatatttcaatg
gttgtcaattatgacctgcctaatactatcgaagattatattcatcgaattggcaggact
ggaagggctggacagaaggggaaggctgttttgtttttcccctacgattactatgtgcct
caaaaggctcgattcgctagggacttggttaaattgctgaacaaggcgaatcatgccgtc
ccagcggagctgcgcgaaattgccggcactag
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