Pseudomonas chlororaphis PCL1606: PCL1606_09930
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Entry
PCL1606_09930 CDS
T03768
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCL1606_09930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcz03019
]
PCL1606_09930
Enzymes [BR:
pcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PCL1606_09930
Messenger RNA biogenesis [BR:
pcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PCL1606_09930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AKA22448
UniProt:
A0A0D5XTP2
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All DBs
Position
complement(1028230..1029633)
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNEDEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPRQRYQEDPVRMLRAVRFAAKLDFGIEKHTAAPIRDLAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELISEQCQRIAIPKRF
TLPIREIWDMQERLPRRSGKRADQLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDAGRRDMIRDLSGKDEAGTGPRKRRRSSGAKRKRATAGAPSGSGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaacagcagccaacactcgctgcaacgcgcccagttcagccgt
tatgcggtgaacatcgtcgaacgcctgcagaacgccggctaccaggcttacctggttggc
ggttgcgtgcgcgacatgctgctcaatatcacacccaaggatttcgacgtcgccaccagc
gccacgcccgaacaggtgcgggccgaattccgtaacgcccggatcatcggtcgtcggttc
aagctggtgcatatccacttcggtcgcgaaatcatcgaagtcgcgacctttcgcgccaat
cacccgcagaacgaggacgaagaagacagcaaccagtcctcgcgcaacgaaagcgggcgc
atcctgcgcgataacgtctacggcaccctcgaagaggatgcacaacgtcgcgacttcacc
atcaacgccctgtattacgatccggtcagtgaacgcatcctcgattacgccaacggcgtg
cacgacatccgcaatcacctcatccggctgatcggcgacccacgccagcgctaccaggaa
gacccggtgcgcatgctgcgggcggtgcgcttcgccgccaagctggatttcggcatcgaa
aaacacaccgccgcaccgatccgcgacctggcaccgatgctgcgggaaatcccctcggcg
cgcctgttcgaggaagtgctcaagctgttcctgtccggccatgccgccgacaccttcgag
atgctggtcgacctgcagctgttcgatccgctgttcccggcgagcgccgaagccctggaa
tacaacccgacctatacccacacgctgatcagcgaagcgctgatcaataccgacctgcgc
atcaagcagaacaagccggtaacccccgccttcctgttcgccgcactgctgtggccagcc
ctgccggctcgcgtgctgcgcctccaggaacgtggcatgccaccgatcccggcgatgcag
gaagccgctcacgaattgatcagcgagcagtgccagcgcatcgcgattccaaaacgcttc
accctgccgatccgcgagatctgggacatgcaggaacgcctgccgcgccgcagcggcaaa
cgcgccgaccagttgctggataacccgcggttccgcgccggttacgacttcctgctgctg
cgcgaaagcgcgggcgaacagaccgacgggctgggcgaatggtggaccgattaccaggac
gccaacgacgccggccgccgcgacatgatccgcgacctgagcggcaaggatgaagcgggc
acaggtccacgcaagcgtcgccgcagcagcggcgccaaacgcaagcgcgccactgccggc
gcaccgagcggctccggcgagtaa
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