Pseudomonas chlororaphis PCL1606: PCL1606_39890
Help
Entry
PCL1606_39890 CDS
T03768
Name
(GenBank) isopropylmalate isomerase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00290
Valine, leucine and isoleucine biosynthesis
pcz00660
C5-Branched dibasic acid metabolism
pcz01100
Metabolic pathways
pcz01110
Biosynthesis of secondary metabolites
pcz01210
2-Oxocarboxylic acid metabolism
pcz01230
Biosynthesis of amino acids
Module
pcz_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
PCL1606_39890
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PCL1606_39890
Enzymes [BR:
pcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PCL1606_39890
4.2.1.35 (R)-2-methylmalate dehydratase
PCL1606_39890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
DUF6627
Motif
Other DBs
NCBI-ProteinID:
AKA25438
UniProt:
A0A0D5Y259
LinkDB
All DBs
Position
complement(4371283..4372701)
Genome browser
AA seq
472 aa
AA seq
DB search
MAGKTLYDKLWDSHLVKQRDDGSALIYIDRHIIHEVTSPQAFEGLRLAGRKPWRIDANIA
TPDHNVPTTPERKGGIAAIADQVSRLQVQTLDDNCDEYGIVEFKMNDVRQGIVHVIGPEQ
GATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMLVRVEGKLP
FGVTAKDIVLAVIGKIGTAGGNGHAIEFAGSAIRDLSIEGRMTICNMSIEAGARVGLVAA
DEKTVEYVKGRPFAPKGAEWDLAVAAWKDLVSDADAVFDTVVELDAAQIKPQVSWGTSPE
MVLAVDQNVPDPAKETDLVKRDSIVRALKYMGLTANQAITDIQLDRVFIGSCTNSRIEDL
RAAAVIAKGRKVASTIKQAIVVPGSGLVKAQAESEGLDKIFLEAGFEWREPGCSMCLAMN
PDRLESGEHCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAVSGRFVDVRELV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaacgctctacgacaagctctgggattcgcatttggtcaagcagcgcgac
gatggctcggcgctgatctacatcgatcgtcacatcatccatgaagtgacctcgccgcaa
gccttcgagggcctgcgcctggccgggcgcaagccttggcggatcgacgccaacatcgcg
accccggatcacaacgtgccgactacgccggagcgcaagggcggcatcgctgccatcgcc
gatcaggtttcgcgcctgcaggtgcagaccctcgatgacaactgcgacgaatacggcatc
gtcgaattcaagatgaacgacgtgcgccagggcatcgtccacgtcatcggcccggagcag
ggcgccaccttgcccggcatgaccgtggtctgcggcgactcgcacacctcgacccacggt
gccttcggcgccctggcccacgggatcggcacctccgaggtcgagcacgtgctcgccacc
cagtgcctggtcgccaagaaaatgaagaacatgctggtgcgggtcgagggcaaattgccc
tttggcgtgaccgccaaggacatcgtcctggccgtgatcggcaagatcggcaccgccggc
ggtaacggccatgccatcgagttcgccggcagcgcgattcgcgacctgtccatcgaaggc
cgcatgactatctgcaacatgtccatcgaggccggtgcccgggtgggcctggtggcggcg
gacgaaaagaccgtggaatacgtcaagggccgtccgttcgcgccgaaaggcgcagagtgg
gacctcgccgtcgccgcctggaaagacctggtgtccgacgccgacgcggttttcgacacc
gtggtcgagctggacgccgcgcagatcaagccgcaggtcagctggggcacctccccggaa
atggtgctggccgtcgaccagaacgtgccggacccggccaaggaaacggacctggtcaag
cgcgactcgatcgtccgtgccttgaaatacatgggcttgaccgccaaccaggcgattacc
gacatccagctggaccgggtgttcatcggttcttgcaccaactcgcggatcgaggacttg
cgcgcggcagccgtcatcgccaagggccgcaaggtcgcctcgaccatcaagcaggccatc
gtggtgccgggctcgggcctggtgaaggcccaggcggaatcggaaggcctggacaagatc
ttcctcgaggccggcttcgaatggcgcgagccgggctgctcgatgtgcctggcgatgaac
ccggaccgcctggagtccggcgagcattgcgcatcgacctcgaaccgcaacttcgaaggt
cgccagggcgccggtggccggactcacctggtcagcccggccatggccgccgcggccgcc
gtcagcgggcgtttcgtcgatgtccgtgaattggtctaa
DBGET
integrated database retrieval system