Phoenix dactylifera (date palm): 103698743
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Entry
103698743 CDS
T03274
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103698743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103698743
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103698743
Spliceosome [BR:
pda03041
]
Complex C
Other components
Step II factors
103698743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRS7_OB
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ResIII
ATPase
FtsK_SpoIIIE
ABC_tran
SLFN-g3_helicase
AAA_24
PhoH
DAP3
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
103698743
NCBI-ProteinID:
XP_038972258
UniProt:
A0A8B8ZLB5
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MTKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQHLEAARCTEIVNPNTKDAKYVIN
VKQIAKFVVGLGDKVSPTDIEEGMRVGRQRILEQRKSLPIASVERRIVDEVKKNDTVIIV
GETGSGKTTQLPQFLYNAGFCKDGKVIGITQPRRVAAVTVAKRVAEECNVELGHKVGYSI
RFEDVTSSSTRIKYMTDGLLLREALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKNVQF
VRSRSTIKQHNFDNKSEVSNKEDKSQCFSTLRACQGAKFTSLKLIIMSASLDARGFSEYF
GGAKAVHIQGRQYPVDILYTYQPEPDYIDATLITIFQIHLEEGPGDILAFLTGQEEIEAV
ERLVHERIHQLPKGSQKLITVLMYSSLPSDLQMNAFKPAPYGCRKVILATNIAETSVTIP
GIKYVIDPGLVKARSYNPVTGMESLIIIPTSKAQALQRSGRAGREGPGKCFRLYPESEFG
KLMDSTVPEIKRCNLSNVVLQLKALGVDDIIGFDFMEKPSRMAIVKSLEQLLLLGALTDD
YRLSDPIGHQMARLPLDPMYSKALILASQFKCMEEMLIVVAMLSVESIFYFPREKMEEAK
AARKKFSSPEGDHISLVNVYRASAECLEKSRTANSKEKKFEKALRKWCRENFINYRSLRH
AQDVHSQIQGHIQQMGLSLSSCGDDMLQFRRCLTASFFLNAALKQPDGSYRAMWSSQTVQ
IHPSSVLFRTKSECIIFNELVRTNQNYVRNSTRVDPLWLPELAPQYYAVEN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaagtcaatgatctttgtggaatcaaagagtctgacactggtttagccgca
ccaagccagtgggatttagtttctgataagcaaatgatgcaagaagagcaacatctagag
gccgctaggtgtacggagattgtaaatccaaacacaaaagatgctaaatatgtgataaat
gtaaagcaaattgccaagtttgtggttggcttgggtgacaaagtctctccaactgatatt
gaggaaggcatgcgtgtagggagacaacggattttagagcagagaaaatcattgcctatt
gcatcagttgagaggaggatcgtggatgaagtgaagaagaatgacaccgtaataattgtt
ggggaaactggaagcggaaagaccacccaattgccacagtttttatataatgctggattt
tgcaaagatggaaaagttattggcatcactcaaccacggcgggttgcagctgtcactgtt
gctaaacgtgtggcggaagaatgtaatgttgaattaggacacaaggttgggtattcaatt
agatttgaagatgtcacatccagctctacaaggattaagtacatgacagatggattgcta
ttaagggaagcactgctggatccatatctatctagatatagtgtcatcattgtcgacgaa
gctcatgaaagaacagtccatactgatgtgttattggggttgttaaaaaatgtgcagttt
gtaagatcacgttctactatcaagcagcataattttgacaacaaatctgaggtgtctaat
aaagaagataagtctcaatgcttcagtactttaagagcatgtcagggtgcaaaattcacc
tccctaaagttgataataatgtctgctagtttggacgcaaggggtttttctgagtacttt
ggcggtgcaaaagctgtacacattcaaggaaggcagtaccctgtggatatactgtataca
tatcaacctgagccagattatatagatgccaccctaattactatttttcagatccatcta
gaggagggtcctggagatattcttgcgtttttgactgggcaagaggagattgaagcagta
gagaggcttgttcatgagcgcattcaccagctacctaaaggcagtcaaaaactcataact
gtacttatgtactcatctcttccttcagatctgcaaatgaatgccttcaagccagcccct
tatggttgtcgcaaggtcatactagcaacaaatattgcggagacttctgttacaataccc
ggcatcaagtatgttatagacccaggactggtgaaagctcgttcatacaacccagtaaca
gggatggagtcattgatcatcattccaacctcaaaagcacaggctcttcaaaggagtggt
cgcgctggacgagagggcccagggaaatgcttccgattgtacccagaaagtgaatttggt
aaacttatggattcgactgttccagagataaagaggtgcaacctctcaaatgttgtgcta
caactgaaagccctaggtgttgatgatattatagggtttgatttcatggaaaagccttca
aggatggctattgtgaaatctttggagcaattactcctcctaggggctttaactgatgat
tatagactatcagatccaattggtcatcagatggctcggctaccattggaccctatgtat
tcgaaggcgctgatcttggctagtcaattcaagtgcatggaagaaatgctgatagtggtt
gcgatgctttcagtggaatctattttttattttcctcgcgagaagatggaagaggcaaaa
gctgcaaggaagaaattttcaagccccgaaggggaccatatatccctggtgaatgtatat
cgggcttctgcagaatgcttagagaagagcagaacagcaaatagtaaagaaaaaaaattt
gaaaaagctctaaggaaatggtgcagggagaacttcatcaattaccggtctctaagacat
gcacaagatgttcacagtcaaattcaagggcatatccagcaaatgggtctatctctatca
tcatgtggagatgacatgcttcagttccgcagatgccttacagcctcattcttcctcaat
gcagcactgaagcaaccagatggatcatacagggctatgtggagcagtcaaactgtacag
atacatccttcttcagttctgttccggacaaagtcagagtgtatcatcttcaatgagttg
gttcgaacaaatcaaaactatgttcgtaactcaacaagagtagatcccctgtggttacca
gaactagctcctcagtattatgctgtagaaaattaa
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