Phoenix dactylifera (date palm): 103704825
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Entry
103704825 CDS
T03274
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103704825
03015 mRNA surveillance pathway
103704825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103704825
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103704825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
103704825
NCBI-ProteinID:
XP_008786501
UniProt:
A0A8B7BVW7
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Position
14:complement(8705841..8718626)
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AA seq
417 aa
AA seq
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MVKPGRARPAAPSGSASPSSSSPSRSTSGSYSRSRSRSRSRSLSYSSSSPSRSVSSRSRS
PPPQRRSPSGAGRRGRSPSPLPKRASPPRKASPVSESVVLHINHLSRNVSEAHLKEIFSN
FGEIVNVELTMDRIVNLPRGYGYVEFRKRSDAEKALLYMDGGQIDGNVIRVKFTLAQRQK
ASPPAKAIPRAPKREAPQRDKVGASAEKDAQQWPRESSPRRKPLSPPRRRSPPANRRVDS
PRHRPDSPPRRRVDSPMRHRADSSPYQRGTPPWRRAASPPRRRSPSPPPRRHRSPARFSP
RRSRGGLVHKRSPIPPRRRSPPRRPRSPPRRSPPPRHRSRSPVRRPVRSHSRSVSPRRRR
GRAPPQRRGRSDSSYSESPSPRKGARKISRSRSPRRPARGRSASISRSKCSPSPRPN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcccggtcgagcccggccggccgctccgtcggggtcagcgtcgccctcttcc
tcttcgccctcgcgctcgacctccggttcgtactcccggtcgcggtctcgctcacgatcc
aggtccttgtcctactcctcctcctctccctcccgaagcgtgagctctcggagccgatca
cctccgccacagagaagaagtccaagtggagctggtagaagaggtcgttcgccatcacca
ctgcctaaaagagcttcacccccaaggaaagcatctccagtatctgagtctgtggttctt
cacattaatcatctgtcaaggaatgtcagtgaagctcatctaaaagaaatattcagtaat
tttggtgaaatagtcaatgtggagctgacaatggaccggattgttaatcttcctcggggt
tatggctatgttgagttcaggaagaggtctgatgctgagaaggctcttctttacatggat
ggtggtcaaattgatggaaatgttatccgagtaaaatttactctagcgcaacggcaaaaa
gcatctccccctgcaaaggcaattcctcgtgctccaaaaagagaagctcctcaaagagat
aaagttggtgccagtgctgaaaaggatgctcaacagtggcctagggagtcttctccacgt
cggaaaccactgtcacctccgcgaagacgctctcctccagcaaatcgaagagttgattca
cctaggcatcgacctgattcacctcctcgtcgtcgtgtagattcgcctatgcgtcaccga
gcagattcttctccttaccaacgtggaaccccaccttggaggagagcagcatctcctcct
agaagacgttctccttctcctcctccaaggaggcatagatcacctgcacggttctctcca
cgaaggagtcgtggtggtctagtccacaagcgttccccaattcctcctaggcggcgatca
cctccaagacgaccaaggagccctccaagaaggtcacctcctcctcgccatcgtagccgt
tcacctgttcgaaggcctgttcgttcccattctagatcggtctctcctcgcagacgcagg
ggtcgggcaccacctcaaaggcgtggaaggtcagactcatcatattctgaatcacccagt
cctcgtaagggagctcgaaagatatcaagaagtcgcagtcctagaaggcctgctagaggg
agaagtgccagcatcagccgcagcaaatgctccccttcccctcggcctaattag
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