Phoenix dactylifera (date palm): 103707271
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Entry
103707271 CDS
T03274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103707271
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pda01002
]
103707271
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103707271
Enzymes [BR:
pda01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103707271
Peptidases and inhibitors [BR:
pda01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103707271
Ubiquitin system [BR:
pda04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103707271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
103707271
NCBI-ProteinID:
XP_038985458
UniProt:
A0A8B9AN73
LinkDB
All DBs
Position
8:30555550..30576248
Genome browser
AA seq
1117 aa
AA seq
DB search
MTMMTPPPLDQQEDDEMLVPHPEFADGPQPMEAVAQTETATTAENQQVEDPPSSRFTWTI
ENFSRLNTKKHYSDIFIVGGYKWRVLIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFS
LAVINQIHNKYTIRKDTQHQFNARESDWGFTSFMPLSEVYDPTRGYLVNDTLVVEAEVAV
RRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DNGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWFKFDDERVTKEDT
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEH
LRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRIQ
KQLPFNVFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLSPQEEAQSVGQLREVSNK
AHNAELKLFLEVELGLDLRPLPPPDKTKEDILLFFKLYDPEKEELRYVGRLFVKALGKPS
EILTKLNELAGFSPNEEIELYEEIKFEPSVMCEHIEKKLTFRSSQLEDGDIICYQKSPAI
DSDDQFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVAHQLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHSIRLPKNSTVADVINDLKTKVELSHPNAELRLLEVFYHKIYK
IFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQMQVQNFGEPF
FLVIHEGETLAEVKARIQKKLQVLDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHSDTAPKRAYTANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacccctccccctctcgatcagcaggaggacgacgagatgctggtccct
cacccagagttcgctgatggtccccagccaatggaagcagtagctcaaaccgaaactgct
actactgctgagaaccagcaagtggaggatcctccatcgtccaggttcacatggacgatc
gagaatttctcgaggctgaacaccaagaagcactactccgacatatttatcgtgggtggc
tacaaatggcgggtgctgattttcccaaaggggaacaacgtggaccacttgtctatgtac
ctggatgttgcggattcagcaaccctgccatatggctggagcagatatgcgcagttcagc
ctggctgtgatcaatcaaattcacaacaaatatacaatccgaaaagacacacaacaccaa
tttaatgcacgggaaagtgattggggattcacatctttcatgcctctaagtgaagtttat
gacccaactagaggatatcttgtaaatgatactcttgttgttgaagccgaggttgccgtt
cgcagggtggttgactactggacttatgactccaaaaaggaaacaggttatgttggccta
aaaaatcaaggagctacttgttacatgaactctcttctccaaactttgtaccatattcca
tacttcaggaaggctgtgtaccatatgcctacaactgaaaatgatatgccgtcgggaagc
attcccttggctctgcagagtctgttttataaacttcagtacagtgacagcagcgttgcg
acaaaagagctaacaaagtcttttggatgggatacatatgattctttcatgcagcatgat
gtgcaagaactcaatagggttctttgtgagaaattagaagataagatgaagggaactgtt
gtggagggcacaatacaacagttatttgaaggccatcatatgaattatatcgagtgcatt
aacgttgactacaaatctagcaggaaggagtctttttatgatcttcagcttgatgtcaaa
ggttgtcgggatgtttatgcttcttttgataaatatgttgaagtcgagcgtcttgaagga
gacaataagtatcatgcagaacagtatggtctgcaggatgctaagaaaggtgttcttttc
attgactttcctcctgttttgcaacttcagctgaaacgctttgaatacgatttcatgcga
gacaccatggtcaagataaatgaccgatatgagttccctctgcaactagaccttgatagg
gataatgggaaatatctttctccagaagcagacaggactgtccgcaacctttatactctg
cacagtgttcttgttcatagcggtggggtgcatggtggacattactatgcttttattcga
ccaactctctctgaacagtggtttaaatttgatgatgagcgggtaacaaaagaagataca
aagagggcactagaggagcagtatggtggtgaggaagagttgccacagacaaatcctggc
ttcaataacactccgtttaaatttacaaagtattcaaatgcatacatgcttgtttatatt
cgggagagcgacaaggagaaaataatatgtaatgtggatgagaaagacattgctgaacac
ctcagaataagattgaagaaagaacaagaagagaaagaacacaagaagaaggaaaaggct
gaggctcacctttatactatcataaaggttgctcgagacgaagatttagctgaacagata
ggaagggatatatattttgatctggtggaccatgataaagttcgcagctttcgtattcag
aaacaattgcctttcaatgttttcaaggaggaggtggcaaaagaatttggtatcccagtt
caatttcagcgtttttggttgtgggccaagcggcaaaaccatacatatcgtcccaacagg
ccattgagccctcaagaagaagcacaatctgttggacagttaagggaggtatccaacaag
gcacataatgctgaacttaagttgtttttggaagttgagcttggactggatttgcgtcct
cttcctccacccgataagactaaagaggatatactactttttttcaagctttatgaccct
gagaaggaggaacttcgatatgtggggaggctctttgtgaaggcgttaggaaagccatca
gaaatactgacaaaattgaatgaactggctggtttttcacctaatgaagaaattgagctt
tacgaggaaataaagtttgagccaagtgttatgtgtgaacacatagaaaaaaaacttaca
ttccgctcgagccagcttgaggatggtgacatcatctgctaccagaaatctcctgcaata
gatagtgatgaccaatttcgctatcctgatgttccttcttttctagaatatgttcacaat
cgacaggttgtgcattttcggtctttagagaagccaaaggaggatgatttttgtttggaa
ttgtcaaagcttcatacttatgatgatgtcgttgaaagagttgctcaccagcttggtctg
gatgatccatcaaaaattcggcttacatctcataactgttactctcagcagcctaaacct
caacctatcaagtaccggggtgtagagcatctctcagacatgctggttcattacaaccag
acttctgacatattatattatgaagtgttggacatccctctgccagaattgcaaggttta
aaaactcttaaagttgcattccatcatgccacgaaggatgaggttgtaattcatagtatt
agactgccgaaaaacagcacagtggctgatgtgatcaatgacctgaaaacaaaggttgaa
ctgtcccatcctaatgctgaactccggttgctagaggtcttttatcacaagatctacaag
atctttccacctaatgaaaagatagaaaacataaatgatcagtactggacattgcgtgca
gaggagattccggaggaagagaagaaccttggtccccatgatcgcttaattcatgtttat
cacttcatgaaagatccaaatcaaaatcagatgcaggttcagaactttggggagcctttc
tttttggttattcatgaaggtgaaactttagctgaggtgaaagctcggatccagaaaaaa
ctccaggttcttgatgaggagttctctaagtggaagtttgcatttttgtcactgggtcgc
cctgaataccttcaggactcagatattgtgtccagtcgtttccagcgaagagatgtctac
ggagcttgggagcagtaccttggattggagcactcagacactgctccaaaaagggcttac
acagcaaatcagaaccgtcacacatttgagaagccagtgaaaatctacaattag
DBGET
integrated database retrieval system