Phoenix dactylifera (date palm): 103711100
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Entry
103711100 CDS
T03274
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103711100
03015 mRNA surveillance pathway
103711100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103711100
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103711100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
103711100
NCBI-ProteinID:
XP_008795323
UniProt:
A0A8B7CB22
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Position
10:complement(3511935..3524834)
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AA seq
414 aa
AA seq
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MVKPARARPATPSGSASASSSPSRSTSGSYSRSRSRSRSRSFSSSSSPSRSVSSRSRSPP
PQRRSPSGAGRRGRSPSPPPKRTSLPRKTSPVPESVVLHIDHLSRNVNEAHLKEIFSNFG
EVVNVELSMDRIVNLPRGYGYVEFRKRADAEKALLYMDGGQIDGNVVRVKFTLAQRQKPF
SPPKAIPAAPKREAPPRDKVGANAEKDAQQRPRESSPRRKPLSPPRRRSPPANRRVDSPR
RRPDSPLRRRVDSPVRRRPDSSPYRRETPPRRRAASPPRRRSPTPPPRRHRSPPRVSPRR
GRGSPVRKRSPIPPRRRSPPRRPRSPPRRSPPPHRRRSRSPLRRPGRSRSRSISPRRGRG
PPHRRGRSSSSYSESPSPRKGARRISRSRSPRRPIRGRSSSPSRSSSSASPRPI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcccgcccgagctcggccagccaccccgtcggggtcggcgtcagcctcctcc
tccccctcgcgctcgacctccggctcgtactcccgctcgcggtctcgctcccgatccagg
tccttctcctcgtcctcctctccctcccgaagcgtgagctctcgaagccgatcccctccg
cctcagagaagaagccctagtggagcaggtagaagaggtcgttcaccatcaccacctcct
aaaagaacttcactgccaaggaaaacatctccagttcctgagtctgtggttcttcacatt
gatcatctgtcaaggaatgtcaatgaagctcatttgaaagaaattttcagtaattttggc
gaagtagtcaatgtggaactctcaatggatcggattgttaaccttcctcgaggttatggc
tatgttgagttcaggaagagggctgatgctgagaaggctcttctttacatggatggcggt
caaattgatggaaatgttgttcgagttaaatttacactagcacaacgtcaaaaaccattt
tcccctccaaaggcaattcctgctgctccaaaaagagaagctcctccaagagataaagtt
ggtgccaatgctgaaaaggatgctcaacagcggcctagggaatcttctccgcgtcggaaa
ccactgtcacctccgcggagacgctctcctccagcaaaccgaagagttgattcaccgagg
cgtcgacctgattcacctctgcgtcgtcgtgtggattcccctgttcgtcgccgaccagat
tcttctccataccgacgtgaaaccccgcctcggcggagagcagcatctccacctagaaga
cgttctcctactcctccaccaaggaggcataggtcacctccacgggtctctccacgaagg
ggtcgtggtagtccagtccgcaaacgctccccaattcctcctaggcggcgatcacctcct
aggcgacctaggagccctccaagaaggtcacctcctcctcatcgccgtcgcagccgttca
cctcttcgaagacctggtcgatcccgttctagatcaatctctcctcgcaggggtagggga
ccacctcacaggcgtggaaggtctagctcgtcgtattctgaatcacccagtcctcgcaag
ggagctcgaaggatatcgagaagtcgcagtcctagaaggcctattagagggagaagttcc
agtcccagccgcagcagcagctccgcttcccccagacctatttaa
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