Phoenix dactylifera (date palm): 103711438
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Entry
103711438 CDS
T03274
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103711438
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103711438
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Helicases
103711438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
ATPase
PhoH
HTH_ABP1_N
AAA_23
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
103711438
NCBI-ProteinID:
XP_008795799
UniProt:
A0A8B7MVM6
LinkDB
All DBs
Position
3:complement(7639513..7651188)
Genome browser
AA seq
1336 aa
AA seq
DB search
MTWERMRSNSNDHDQSSGETVQLLGTEVTQDGLNSSADGSNAILLPEKKKSNSKDKGKAS
KKNKNKEVPVLSKSKQRKLKKLEEEKQKKLLQARSIKILEKCKIWDGAYSLLHSSGTIGQ
AETMKEKRRRAVQLSKAGIDVPEDISPFKKNSQNVSDDNEVTGKLNHQKSDPENVCCDNS
VLPAECKERYDGKHSKSVEIHSTATNKSQAVVDIGTDGVPPTMVVPDKEISTCSLEEQKH
SAFISSSCDKGHETDSKGKEADDSKVTYQNMKVPPDFMDQEHVNAPIVVHVSRPLEVEEK
RKDLPIIMMEQEIMEAINENSIVILCGETGCGKTTQVPQFLYEAGFGSSDHSDRKGIIGV
TQPRRVAVLATAKRVSFELGLHLGKEVGFQVRHDKMIGDSCSIKFMTDGILLREVQSDFL
LKKYSVIILDEAHERSLNTDILIGMLSRIIKLRQKLYAEQQEKMLSGGKISPENMITQLK
LILMSATLRVEDFISNRKLFHEPPPVLEVPVRQFPVTVHFSKTTQEDYLGQAYKKVMSIH
KRLPPGGILVFVTGQREVEFLCKKLQRASEQLKEKNSMRKKDNEITASSDLDMKEINEAF
EIGSNSLDQQTDRFSSYEEDGNNPDMHSDLSDAESESELEVDSGDEDSVKSEAPEKTGLV
LDFLNDVESLSSLKASFEALAGNLSNQDCKEKPSLPDAPSLEKSMEVATSSAGALYVLPL
YAMLPASAQLRVFEEVPEGDRLVVVATNVAETSLTIPGIKYVVDTGKEKVKTYNYTNGMA
AFEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAAFSKDDLFPDFSCPEISKIPVDGVVL
LMKFMGIDKVANFPFPSPPETKALVEAELCLKALEALDSQGRLTPMGRAMAQYPMSPRHS
RMLLTVIQIMRNQQGYARANFVLGYAVAAASALSFQNPFLMQFGENHGDNDIDQEKSDTE
KMKDQEEKLRQKKVKAMEREARARFCNPSSDALTIAYALQIFELAENSVQFCKENSLHLK
TMEDLSKMRKQLLQLIFYQSKFCEEFAWNHGTADDVELSWRIRSDKHPLLMNEEELLGQS
ICAGWADRVAKRVRTISESSENDGRARAVRYQSCALKDTVFLHRWSSVSRSAPEFLVYTE
LLQTKRPYMHGVTSVKSDWLVKYAISLCTFSAPLTDPKPYYEPLSDQVFCWVSPTFGQHN
WQLPLHRLPIKNDILRASVFACALLEGQVLPCLGSFQKFLAAPPSCLLRPEALGQRRVGD
LLSRLKIGSRIIDSRAMLRDAWSQDPQFLHTEIKRWFQERFHYQFGDVWEQMHHEVLLEG
CELFPKRAKKGRKKVK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggagagaatgaggtcgaattctaatgatcatgatcagtcttcgggtgagacc
gttcagttgctcgggacggaagtaactcaagatggtttgaattccagtgcagatggaagc
aatgcgattcttttgcctgaaaagaaaaagagcaactcgaaagacaaaggcaaggcttct
aagaagaataagaacaaggaagttccagttttgagcaaaagcaaacagaggaaattaaaa
aagttggaggaggagaagcaaaagaagctgctgcaagctagaagtattaagattctagag
aaatgcaagatatgggatggtgcatattctcttctacattcttcaggcactattggtcaa
gctgagactatgaaggaaaaacgcagacgagctgtccaactttctaaggctggcatagat
gtgcctgaggacatttcaccatttaagaagaacagtcagaatgtttctgatgataatgaa
gtcactgggaagctcaatcaccaaaaaagcgatccagaaaatgtctgttgtgataatagt
gttctgcctgcagaatgtaaggaaagatatgatggcaaacatagcaagtctgttgaaatc
cattcaacagcaacgaacaagagtcaggcggttgtggatattggaacagatggggtgcca
ccgactatggtagttccagataaggagatcagtacatgcagtctagaagagcagaaacat
tcagcattcatttcgagtagttgtgataaaggacacgagaccgattcaaagggaaaagag
gcagatgattcaaaagtaacttatcaaaacatgaaggttcccccagacttcatggaccag
gagcatgtgaatgctcctattgtagtgcatgtatccaggccattggaggttgaggagaag
aggaaagatcttcccataattatgatggaacaggagataatggaagctatcaatgagaat
tctattgtaatattatgtggagaaacaggatgcggtaaaactacccaggttccacagttc
ttatatgaagctggctttgggtcaagtgatcatagtgacagaaaaggaatcattggtgtt
acccaaccacggcgtgtagctgttctggccactgctaagagagtgtcctttgaattagga
ctccatcttggaaaagaggttggttttcaagttaggcatgacaaaatgataggagatagc
tgctccatcaagtttatgactgatggcattttgcttcgagaagtccagagtgatttttta
ctaaagaaatactctgtaattattctggatgaggctcatgagaggagcttgaacacggat
atactcatcggaatgctttctcgaattataaagcttcgccagaaattatatgcagagcag
caggagaaaatgctttcaggaggaaaaatcagtcctgaaaatatgatcactcaattaaag
cttatacttatgagtgctaccttgcgagttgaggacttcatctcaaacaggaaattattt
catgaacccccacctgttttagaggttcctgtcagacaattccctgtgacagttcacttt
tcaaagacgacacaagaagattatttaggacaagcttataaaaaggtcatgtcaattcac
aagagacttccaccaggtggcatacttgtatttgtcaccggacaaagggaagtggagttc
ttgtgtaaaaagttgcaaagagcatcagaacaattaaaagaaaaaaattctatgaggaag
aaagacaacgaaatcactgcaagctcagatctggatatgaaggaaatcaatgaagcattt
gagattggaagcaattcactagaccaacaaactgacaggtttagctcctatgaggaggat
ggaaacaatccagatatgcattctgatttatctgatgcagaatcagagagtgagctggaa
gttgatagtggagatgaagattctgtcaagtctgaagccccagagaagactggtttggtg
ttagattttctgaatgatgttgaaagcctttcttctttgaaggcttcatttgaggcttta
gctggaaatttatccaaccaagattgcaaagagaaaccaagtcttcctgatgctcctagt
ttagaaaaaagtatggaagttgctactagttctgctggtgcattatatgttttgccccta
tatgcgatgctccctgcttctgcacagctccgtgtatttgaagaggttcctgaaggagat
cggctggttgttgttgctactaatgtggccgagacttctttgaccatcccaggcataaaa
tatgtggttgacactggcaaagaaaaggtcaagacctataattacaccaatgggatggca
gcatttgaagtccagtggataagcaaggcatcagctgctcagcgtgctggaagagctgga
agaactggacctggccactgttaccgcctctattcatctgctgcctttagtaaagatgat
ttgtttcctgatttttcctgtcctgagatatccaagattcctgtagatggtgttgtcctc
ctcatgaagttcatgggcatcgataaggttgcaaatttcccgtttccatcacctcccgag
accaaagctttggtggaagctgaactttgcttaaaggctcttgaggcacttgatagccaa
ggaagacttacacccatggggagggcgatggcacagtaccctatgagtcctcgtcattcc
cgcatgcttctgacagttatccaaatcatgaggaatcagcaaggctatgccagagcaaat
tttgtgctaggatatgctgttgctgctgcatcagctttaagctttcaaaatcctttcctg
atgcagtttggggaaaaccatggggacaatgatattgatcaagaaaagtctgataccgag
aaaatgaaggaccaggaggaaaagctgaggcagaaaaaggtaaaagccatggagagagag
gctcgtgcaagattttgtaatcccagtagtgatgctttaactattgcatatgctttgcaa
atttttgagcttgcagaaaactcggtgcaattctgcaaagaaaactcgcttcacttgaaa
acaatggaagatctgtccaagatgaggaaacagctgctacagttgatattttatcagagc
aagttttgtgaggaatttgcatggaatcatggaactgctgatgatgtggagctctcttgg
aggatccgttctgataagcatcccttactaatgaacgaagaggagcttttagggcagtct
atatgtgctggttgggcagatagagttgcaaagcgtgttcgtactatttcagaatcatca
gaaaatgatggaagggctcgtgctgttcgctatcaatcttgtgctttgaaggatacagtg
tttctccaccgctggtcttctgtttctcgatcagcaccagagtttctagtttacactgaa
cttcttcaaacaaagaggccatatatgcatggagtgaccagtgtaaagtcagattggctt
gtcaagtatgctatctctctttgcaccttctctgcaccacttacagacccgaaaccttat
tacgagcctctaagtgaccaagtcttctgctgggtcagccctacttttgggcagcataat
tggcagctcccattgcatagattacctatcaagaatgatatccttcgtgcgtccgtattt
gcttgtgctttgcttgaaggacaagtattgccatgcctaggatcctttcagaagttcttg
gctgcaccaccatcttgcttattgaggcctgaagcattggggcaaagaagggttggggat
cttctcagcaggttaaagattgggtcaagaatcattgatagccgagctatgctgagagat
gcttggagtcaagatcctcagtttttgcataccgagattaaacgctggttccaggagaga
tttcattatcagtttggagatgtctgggaacaaatgcaccatgaggttcttcttgagggc
tgtgaactttttcctaaaagggcaaagaaaggaaggaaaaaggtaaaatga
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