Phoenix dactylifera (date palm): 103718136
Help
Entry
103718136 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103718136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103718136
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103718136
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
HECT type E3
103718136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HEAT_2
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
103718136
NCBI-ProteinID:
XP_008805036
UniProt:
A0A8B9APP3
LinkDB
All DBs
Position
12:complement(6060451..6072021)
Genome browser
AA seq
1547 aa
AA seq
DB search
MDRGRKRAEASDKLPADKRACSLSEFWSGSSSLPPTPEPAAAAAVASSSSEPVDCDMESS
SSGRSDRAGDSEYGSCDSDDERGYGRWVFDDPSLCGASKGKFQKIFASLEDDAGPGVQLA
ALAELCEVLSFCMEDSLGYFPMETSVPVLVRLAGPETSPDVMLLAVRALTYICDGMPRMA
DALVRHGALPVLCGKLLAIEYLDVAEQSLEALEKISRSEPVHCLQAGTIMAALGFIDFFS
TSMQRVALSTVANVCKKLPLDCSSLVMESVPILCKLLQYEDRKLVETVATCLIRITECFT
HSPELLDVLCKHEVVHKTLHLIAIDGRISLSQATYTGLISLLTKLATSSLVAVRTLFELN
ISSILRNILMASDLSHGTPCSPFEDVQSNQMHEVLKLLNQLIPPVARDVEDVQLALAKEK
ILVDEPSFLHQFSMDILPLSIQVVNPGANVYISYGCVSIINKIVYFSTPEMLMDLLKVTN
ISSFLAGLLARKDRHVLISTLKTVEILMQKLPGVFLSSFVKEGVIYAIDSLLMQKNCSQS
TQRFGHMQHSDNQMATRDMPRCLCYEFDSSRASSCEMKTCRVGKDTVLTLAKHLKTTYFT
SEAVNSEMGLTEVLHKLKTFCAVLNDNVDRAAANDDCELNEEYLSHILDQVIRELYGKET
ISTFEFIESGIVRSLAHYLSNGKYLQGTSCGCDLSNHFLAVLRRFRTFACISLSKMNQGW
ENMLITLLVRKLQNALSSLDSFPVILSHVPKPRNTYADIPFRRCTMLPCLKVRFVREEGE
TTLHDHDNVLNVELSSSLEDIEGYLWPKVSTKNKEDEAESARKGMISTSDIAAGSMHAEE
KNPQDLVAKIWQEPSFSSSPEGLACQEGQSLSVDLSPRQRDLIAVITSNLSSLGERRVEG
QKSSASPSNGCTERKLNFCLEGKQLDQSITLYQAILEELLSAEPDAIVGPKFWNKVYKVT
YKRAEPKSSDAQMPYDASLCNKIVFSWQKLSFFSSMLLAELPCTLDKSNPIYDILFMLKI
LEGLNRISFHLLSDERNHAFAEGRIENFDDLKVMVSPVPQVEFISSKLTDKLEQQMRDSL
ALSSGSMPLWCNQLMAACPFLFSFDARRKYFRLTAFGSSRSQLNPNQRLNSSDTNSFIER
WLQSGSFSRKKFKVDRNNILGSAAKMMELYAHSKGVLEVEYNEEVGTGLGPTMEFYTLVS
QEFQKVGMGMWREDLGLHGGSSKVVGEFELLVAPFGLFPRPWSAENGVSNGIQFPEVIKK
FFLLGQLVARAIKDGRILDLPFSQAFYKVILEQELGIYDIQSFDPKLGRTLLEFQALVNR
KKVLESISRENYGCASDMYYRNTRIEDLCLDFTLPGYSNYELTLESNSKMVNIANLEEYI
ALVVDATTKCGISRQVEAFKSGFNEVFRLKTLQIFTEDELELLICGERDTWDFIELVDHI
KFDHGYTASSPPVVNLLEIIQEFECYRRRAFLQFVTGAPRLPPGGLAALNPKLTVVRKHC
SNDADMDLPSVMTCANYLKLPPYSSKERMRQRLLYAITEGQGSFHLS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggatcggggacggaagcgggcggaggccagcgacaagctgccggccgacaagcgggcg
tgcagtttatcggagttctggtcgggttcctcctctctcccgccgacgccggagccggcg
gcggcggcggccgtggcctcgtcctcctccgagccggtggactgcgacatggagtcctcc
tcctccgggaggtccgacagggctggggactcggagtacggctcctgcgactccgacgac
gagcgcggctacggccgctgggtgttcgacgacccttcactgtgcggggcaagcaagggg
aagttccaaaagatctttgcgagcctcgaggacgatgctgggccgggtgtgcagcttgcc
gcgctcgccgagctctgcgaggtcctgtccttctgcatggaggattcccttggttatttc
ccaatggagacgtcggtcccggtgctcgtgaggctggcgggccccgagaccagccccgat
gtcatgctccttgctgtccgggcgctcacgtacatctgcgatgggatgccgaggatggct
gatgccctcgttaggcatggagcgcttcctgtcctctgcggaaagttattggcgatcgag
tacttggatgtggccgagcagtctttggaagcattggagaagatatctcgatcagaacct
gttcattgtttgcaagcagggacaattatggcggcactgggtttcattgatttcttctca
acaagcatgcagagagttgcactctccactgtagcaaacgtctgcaagaaacttccttta
gattgttcttctcttgtcatggagtccgttcctattttgtgcaaactccttcaatatgag
gacagaaagctcgtggaaactgttgctacctgcttgataaggataactgaatgtttcacc
cattctccagagttgctggatgtactgtgcaagcatgaggtggttcataagactttacat
ttgatagctatcgatggtcggatatcactgagccaagcaacttatactggcttgatcagt
cttctcaccaagctagccactagttcccttgtagcagtgaggaccctctttgaactgaat
ataagcagcatattgaggaatattctaatggcttctgacctttcacatggcactccttgc
tcaccttttgaagatgtgcaatccaatcagatgcatgaagttttgaagttactgaaccag
ttgatccctcctgtggcaagagatgttgaagatgttcaactagcactagccaaggaaaag
attttagtggatgaacctagttttctgcatcagttctcaatggatattcttcctttgtct
attcaggtcgtcaaccctggtgcaaatgtatatatttcttatggctgtgtttcaatcata
aacaaaattgtttatttcagtactccagaaatgcttatggacttgctcaaggttacaaac
atttcaagctttttagctggtttgctggcccggaaagatcgccatgtattgatttcaact
ctgaagactgtcgagattctcatgcaaaagcttcctggtgtttttttaagctcttttgtt
aaggagggtgttatttatgcaattgactcacttttaatgcaaaaaaactgttcacaatct
actcaacggtttggtcacatgcaacactcagataatcagatggctacaagagacatgccc
agatgcttatgctatgaatttgattcatccagggcatcatcctgtgagatgaaaacatgt
agagttggaaaagatactgttctcactttggcaaaacatttaaagactacctactttact
agtgaagcagtgaattctgagatgggtttgactgaagttctgcacaagcttaaaactttt
tgtgctgttctaaatgataatgtggacagggctgcagcgaatgatgattgtgaactaaat
gaagagtatttatctcatatattagatcaagttataagggagctttatggaaaagaaact
atctccacatttgagttcattgagagtggaattgtaagatccttggcacattatttatcc
aatggcaagtacctccaaggaacttcatgtggttgtgacttatcaaatcactttcttgct
gtactgagaagattccggacatttgcctgtatttctctgtcaaaaatgaatcagggatgg
gagaatatgcttatcactttattagtacggaaattgcagaacgcattgtcttcgcttgat
agttttcctgttatattgagccatgttcccaagcctagaaatacttatgctgatatccca
ttcaggcgctgcactatgctcccttgcttaaaagtacgctttgtgagggaagaaggtgaa
acaaccttgcatgaccatgacaatgtgttaaatgttgagctctcttcatcattggaagat
attgaaggatatctatggcccaaagttagcacaaagaataaggaagatgaggcagaatct
gcaagaaagggaatgatcagcacaagtgatattgcagcaggaagtatgcatgctgaagag
aagaatcctcaagatctagttgcaaagatctggcaggaaccatctttttctagctcacca
gagggccttgcatgccaagaaggacaatctttatcagtggatcttagccctagacagaga
gatctaatagctgtgattacctccaatctttcatctcttggcgagagacgagttgaaggc
caaaaaagttctgcatctccaagcaatgggtgtacagagcgaaagttgaacttttgttta
gaagggaagcaacttgatcagtctattactctttatcaagcaattctagaggagctttta
agtgcggaacctgatgcaattgttggcccgaaattctggaataaagtttacaaagtaaca
tataaaagagcggaaccaaaatccagtgatgctcaaatgccttatgatgcatctctttgc
aataaaattgttttctcatggcagaaactatcatttttctctagtatgttacttgccgag
cttccttgtacacttgataagtccaatccgatatatgatatattgttcatgctgaaaatt
ttggaaggcttgaacaggatatcatttcatctgttgtctgatgaaaggaaccacgcattt
gctgaaggtagaatagaaaattttgatgatctgaaagtgatggtgtctcccgttccacag
gttgagttcataagcagtaagctgactgataaattggagcagcagatgcgagattcactg
gcattaagctctggcagcatgcctctgtggtgtaatcagttaatggctgcttgccctttc
ttattttcttttgatgcaaggcggaagtatttccgtttgactgcatttggttcttcaaga
tctcagcttaatccaaatcaacgtctgaatagtagtgacaccaactcttttattgaaaga
tggttacaatcaggttcattttcccgtaagaaattcaaagttgatcgcaacaatattctg
ggttctgctgcgaaaatgatggagttatatgctcatagtaagggtgttcttgaagtcgaa
tacaatgaggaagttggtactggcttaggcccaacaatggagttctacacattggtaagt
caagagtttcaaaaagttgggatggggatgtggagagaggatctgggtcttcatggtgga
tcaagtaaagtagttggtgaatttgaattactggtagctccttttggattgtttcctcga
ccttggtcagcagaaaatggtgtctcaaatgggatccaatttccagaagtaattaaaaag
ttcttccttcttgggcagcttgtagcaagggcaattaaagatgggaggatcctggattta
ccattttctcaagcattttataaagttatccttgagcaggagcttggcatatatgatatt
caatcatttgatcccaaacttgggaggactctcctggagtttcaagctctcgtcaatagg
aaaaaggttttagagtccatttccagggaaaattatgggtgtgcatctgatatgtattac
cgcaataccagaatagaggatctttgtcttgatttcactcttccaggctactccaattat
gagcttactctggaaagtaactcgaaaatggtaaatattgctaacttggaagagtatatt
gcactagttgtcgatgcaactactaaatgtggaatttctcgacaagtggaagcttttaaa
tctggatttaatgaggtgtttcggctgaaaactcttcaaatctttactgaagatgagctt
gagctattaatttgtggagaacgggatacttgggattttattgagcttgtggatcacatc
aagtttgatcatggctacacagctagcagtcctcctgttgttaatttattagaaatcata
caagaatttgagtgctatcggcgcagagctttcttgcaatttgtgacaggagctcctcga
ctgcctccaggaggcttagctgcactcaacccaaaattgacagttgttcgtaagcattgt
agcaatgatgcggatatggacttgccaagtgtgatgacctgcgctaattatctaaagctc
cctccatactcttccaaggagagaatgaggcagaggctgttatatgcaataacagaagga
caggggtccttccatctctcttaa
DBGET
integrated database retrieval system
