Phoenix dactylifera (date palm): 113462887
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Entry
113462887 CDS
T03274
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113462887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
113462887
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113462887
Spliceosome [BR:
pda03041
]
Complex A
U2 snRNP components
U2 related factors
113462887
Complex B
113462887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113462887
NCBI-ProteinID:
XP_038986366
UniProt:
A0A8B9AI26
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All DBs
Position
9:complement(21119273..21127398)
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AA seq
1163 aa
AA seq
DB search
MEDRMEEGKQRSSRRGDASDRKEDSRRGDRERGKERNGERHRERDKGRDRDRDSEKGDRE
SRRSERERSADDKYREKHRDSRHKDRDRVRDREREREKERERAKEKAREKERDRERDDRE
REREEREREKEREREREKEREREKEREREREKERERTRRREEREREREREDRERERDRER
ERERERAREKRRELERDEDRDHDLDRKRRRREDSRERERERSSRSDRHRDREGSEDGRRN
RADEEVENKEKRTREEDLEEEQRKLDEEMEKRRRRVQEWQELRRKKEEQEREKLGGANAE
EQPKSGKNWTLEGESDDEEAVPAKSDKDMAMDEDSRPVDRDGHAMAVDSVNGVAVPDGAE
ASNDGEEEIDPLDAFMNSMVLPEVEKLQSAEIAVKTDDKKAGSEKASKETVVSNGDQSKR
GAKNSVGRIIPGEDSDSDYEDLENDEVALEDEDDEEFLKRVKKTKAEKLSIVDHSKIQYL
PFRKNFYIEAKEISRMTAEEVAAYRKQFELKIHGKDVPKPIKTWSQTGLTSKILDTIKKL
NFEKLMPIQAQALPIIMSGRDCIGVAKTGSGKTMAFVLPMLRHIKDQPPVVPGDGPIGLI
MAPTRELVQQIHSDIKKFTKVLGINCVPVYGGSGVAQQISDLKRGAEIVVCTPGRMIDIL
CTSSGKISNLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEIL
ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVQSQD
KCDALLRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSVAARGLDVKELEL
VVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLAKALELSEQAVPADLK
ALADSFLAKVRQGTEQAHGTGYGGSGFKFNEEEDEARKAAKKAQAREYGFEEDKSDSDSE
DDGIRKAGADLSQAFANAQAAALAAASKVPITSMPAPVSATQLLSTAGLPAVTLPGIAGL
PISATLPVTASHTEAAARAAALAAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWK
ITHKETLGPISEWTGAAITTRGQYYPPGKIPGPGERKLYLFIEGPTESSVKKAKAEVKRV
LEDYTAQALSLPGAAQPGKYSVL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgcatggaggagggtaagcagagatcatcgaggagaggagatgcctccgat
aggaaggaggattccaggagaggagatcgcgaaagggggaaggagcggaacggggagagg
caccgggagagggacaagggccgggatcgggatcgagattccgagaagggcgatcgggag
agccgtaggtcggagcgggagaggagcgccgacgacaagtatcgcgagaagcacagggat
tcccggcacaaggacagggacagggtcagggacagggagagggagagggagaaggaaagg
gagcgagccaaggagaaggcccgggagaaggagagggatagggaaagagacgatagggaa
cgggagagggaagaaagggagagggagaaggagagggagcgggagagggagaaggagagg
gagagggagaaggagagggagagggagagggagaaggagagagagaggacaagaaggaga
gaggagagggagagggaacgagaaagggaagatcgagagagggaaagggacagggagagg
gaaagagaaagggagagggccagggagaagcggcgggagttggagagagatgaggacaga
gaccatgaccttgaccggaagcggcggagaagggaggattcccgagaaagggagcgggag
cggagcagccgatctgacaggcacagggacagggaaggcagtgaagatggcaggaggaat
agggctgatgaggaggttgagaacaaggagaagagaacccgtgaagaagatcttgaagag
gagcagcggaagctggacgaagagatggaaaagcggcgccgtagggttcaggagtggcag
gagcttagaaggaagaaagaggaacaggaaagagagaaattgggcggggccaatgctgag
gaacaacccaagtctggtaaaaattggaccttggagggtgaatctgatgatgaagaagca
gtccctgcaaaatctgataaagatatggccatggatgaagattccaggccggttgatagg
gatggccatgccatggcagtagattctgttaatggggttgccgtgcctgatggtgctgag
gcgtctaatgatggtgaggaggaaattgacccgcttgatgctttcatgaactctatggta
ttgcctgaagtcgagaagctgcagagtgccgagattgctgttaagactgatgataagaaa
gctggctcagagaaggcctccaaagaaactgttgtcagtaatggtgatcaatccaaaagg
ggcgcaaagaacagtgtgggaaggataattcctggtgaagattctgactctgattatgag
gatcttgagaatgatgaggttgcacttgaagatgaagatgatgaagaattcttgaaaaga
gtgaagaagaccaaggctgagaagttatcaattgtcgatcattcgaagattcagtatctg
ccattcaggaagaatttctatatcgaagcaaaagaaatctcgaggatgacagctgaggaa
gttgcagcctatagaaaacagtttgaattgaagatacatgggaaggatgtgccgaagcct
atcaaaacatggagtcagactggattaacgagcaaaattctggatacaatcaagaagctt
aattttgaaaaactgatgcccattcaagcgcaggcgctccctatcatcatgagcgggcga
gattgcataggagttgccaaaactggttcaggtaaaacaatggcttttgttttgccaatg
ctgagacatattaaagaccagcctccagtggtgcctggggatggtcctatagggcttatt
atggctcctactagggagcttgtccaacagattcacagtgatattaagaagttcacaaag
gttctaggcattaactgtgtgccagtgtatggaggctcaggtgttgctcagcagattagt
gatctaaaacgaggtgctgaaattgttgtctgcactcctggtaggatgatagatatactt
tgtacgagtagtggaaaaattagtaaccttcgcagggtcacttacttggtgatggatgag
gctgatagaatgtttgacatgggctttgaacctcagattaccaggattgttcaaaataca
cgtcctgaccgtcagacagttttattttcagctacatttcctcggcaggtggagatattg
gcacgcaaggtgttgaacaagcctgtcgagatccaggtcgggggaaggagtgtcgtgaac
aaagatataactcaattggtcgaggttagacctgaaagcgaccggtttttgaggctatta
gagattttgggagagtggtatgagaaggggaagatccttgtcttcgttcaatcgcaagac
aaatgtgatgctctactgagggatttactcaagcatggttatccttgcctctcgcttcat
ggggcgaaggatcagactgaccgtgagtctactatctctgattttaagagcaatgtctgt
aacctgctggtagcgacaagtgttgctgccagaggtttagatgtgaaggagcttgagctg
gttgtcaactttgatgtcccaaaccactacgaagattatgttcaccgtgttggccggaca
ggtcgggcaggcagaaagggttgtgccatcacattcatttctgaggaagatgcacgttat
gcaccagatctcgcaaaagccttggaactttctgaacaagctgttcccgcagatctaaag
gcactggctgattcattcctggcaaaggtgcgccagggaacagagcaagcccatgggact
ggctatggtggaagtggcttcaagtttaatgaagaggaagacgaagcaaggaaggctgcc
aaaaaagctcaggcaagagaatatggatttgaggaggataaatcagattcagattctgaa
gatgatggaattcgaaaggcaggagctgacctttcacaggcttttgctaatgcccaagct
gctgcattggctgctgcttcaaaggtacctattacttcaatgcctgctccggtttccgcc
actcaattactttctaccgccggtctgcctgctgtcactcttcctggaatagctggtcta
cctatctctgcaactctacctgtaactgcttcacacactgaggcagctgctagggcagct
gcactggctgctgccatgaatttacagcacaatttggcaaagatacaagctgatgccatg
cccgaacactatgaagcagaattggagatcaatgatttcccacaaaatgctcgctggaag
atcacccataaagagaccttgggtccaatctcagaatggactggagctgctattactacc
aggggccagtactatcctccaggtaagattcctggtccgggagaacgcaaactttacctg
tttattgaaggccccaccgagtcttctgtgaagaaggctaaagctgaagtgaaacgagta
ctggaggattacacggctcaggctctctcccttcctggtgctgctcaaccaggcaagtac
tctgttctttag
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