Phoenix dactylifera (date palm): 120110216
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Entry
120110216 CDS
T03274
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120110216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
120110216
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
SR proteins
120110216
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120110216
NCBI-ProteinID:
XP_038980490
UniProt:
A0A8B9A1L3
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All DBs
Position
3:9409144..9422849
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AA seq
299 aa
AA seq
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MSKRSSRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED
AIRGRDGYNFDGHRLRVELAHGGRGQSSSFERHSSYNSGGRRGGVSRRSEYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSEVFRDGGGTTGIVDYTNYEDMKYAIRKLDDSEFRNAFSRA
YIRVREYDSRRSLSRSRSRSRSYSRSRSPSRSRSVSRSQSKSPKARSSRRSLSRSRSRSV
SSRSRSGSRGRSLSRSQSKSRSPLISPRRSKPASRSPRKHGPSRSRSSSRSRSPAAKSD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgttccagtcgaaccctatatgttggcaatctccccggagacatccgcgag
agggaagttgaagatctgttttacaagtatgggcccattgttgatattgatctgaagatt
cctccaaggcctcctggttatgcttttgttgagtttgaagatgctcgtgatgctgaagat
gctattcgtggtcgtgatggatataattttgacggtcatagattaagagtggaacttgca
catggtggacgaggccagtcttcatcatttgaacgacatagcagttataatagtggggga
cgccgtggtggtgtctcgaggcgttcagagtatcgtgttcttgtcactggtctaccttcg
tctgcatcttggcaagatctaaaggatcatatgcgccgagctggtgatgtttgtttctct
gaagtgttccgtgatggtggaggtactacaggaattgtggattatacaaactatgaggat
atgaaatatgcgatcagaaagctcgatgactctgagtttcgcaatgcattttctcgggca
tatataagggtgagggagtatgattctaggagaagcttatctaggagccgaagccgtagc
cgttcctactcaagaagccggagtcctagtcgcagtagaagtgtcagccggagccaaagc
aagtctccgaaggctagatcatcacgccgttctttgtcgagatctagatcaagatctgtg
tcttctcgatctcgttcaggatcaagggggcgctctttgtcaagatcacaatcgaaatcc
agatcacccttgatttctccacgccgtagcaaacctgcgagcagaagtccaaggaagcac
ggtcctagtaggagcaggagttcatcgcgttctcgatcccctgctgctaagtctgattaa
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