Pocillopora damicornis (lace coral): 113675661
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Entry
113675661 CDS
T05773
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113675661
04121 Ubiquitin system [BR:
pdam04121
]
113675661
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113675661
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113675661
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113675661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
Filamin
DUF4934
SGL
TolB_like
HydF_tetramer
DUF5711
DUF2564
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
113675661
NCBI-ProteinID:
XP_027048061
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
DVVPLEKAADDEKANITARAKLVEEMKEVCRGVIREFENTENELETNITTAKRQVSQATE
QMMGKLRQLEREAITALEKTRVSRIEKLHSGKASVFSFEKQLDQAFEFSNNLVERSSSSD
IMLNKKNVEERIKDLIDTTMPALPVSSCVEFVSKCEPESLSLGFTKFSKTDVQGSTVEGL
DQNFQAGVEAELLICLKSSEGEIRNTQHTDRVEIHIDPADQVRSLVTSEKEDGNFQAKFV
AKVPGTYKIELKINGQKLAKSPFSILVNARELNVVGKLDLHGEMLRGPAGIAVNSKGVIA
VADRDGHCILVFDETGKFVRKIGSYGDENGQLEDPVDVTFVNDDEILVVEQCNHRMQQFN
VQTGNFVKSFGKKGSRDGELKYHLSVCITSDGRFIVVADFYNFRIQVFTMDGEPVFKFGD
SGPERLDHPLSCVCYEEKFFVTDLNNNCVKVFDQRGQFLYKFGEKGNGDGQMDRQYGLCV
DKHNNVFLCD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gatgttgttccgcttgaaaaggcagcggacgatgaaaaagcaaacatcactgccagagca
aagctggtcgaagagatgaaggaggtctgccgaggtgttattcgtgaatttgaaaacacg
gaaaatgagttggaaacgaacattaccacagctaaacgccaagtttcccaagcaaccgaa
cagatgatgggaaagcttcgccaactggaacgtgaagccattactgccctagagaagact
cgcgtgtcaaggattgagaaattacattctggaaaagcatcggttttctctttcgaaaag
caacttgaccaagcatttgagttcagtaacaacctggttgagagaagctcaagttcagac
ataatgctaaacaagaaaaatgtagaagaacgaatcaaagacctcatcgacaccacaatg
cctgcacttccggttagctcgtgtgtggagtttgtgtcgaaatgtgaaccagagagtttg
agtctgggatttacgaagttcagcaagacagatgtgcaaggatcgaccgtggaaggactg
gatcagaatttccaagctggtgtagaggcagagctactaatttgtctcaaatcaagcgaa
ggagaaatcagaaacactcagcacacagatcgtgttgaaatacacatagaccccgcggat
caggtgaggagcttggtgacgagtgaaaaagaagatggaaatttccaagcaaaatttgta
gcgaaagtaccaggtacttataaaatagaattaaagataaatggacagaaacttgccaag
agtccattttctattctggtcaatgcacgagagttaaatgttgtaggcaagttggactta
catggagaaatgctccgaggtccagccggcattgctgtgaacagtaaaggtgttattgct
gtggctgatcgtgacggtcattgtatcctggtatttgatgagacaggaaagtttgtgcga
aaaattggttcttatggagatgagaatggacaattagaggatccagtcgacgtcacgttc
gtaaacgatgacgagattctggtggtggaacaatgtaatcaccgaatgcagcagtttaat
gtacagacagggaactttgtgaaaagctttggaaaaaagggaagtagagatggagagtta
aagtatcatttaagtgtttgtattacaagtgatggacgttttatcgttgtagcggatttt
tataatttcagaattcaggtgtttacaatggatggtgaacctgtgtttaagtttggagac
agcggtccagaaaggctggatcatcctctcagctgcgtttgttacgaggaaaagttcttt
gtaactgaccttaataataactgtgtgaaagtgtttgatcagagaggacagtttttgtac
aagtttggagaaaaaggaaacggtgatggacagatggatcggcagtatggcttatgtgtt
gacaaacataataacgttttcttatgtgat
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