Pocillopora damicornis (lace coral): 113678531
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Entry
113678531 CDS
T05773
Name
(RefSeq) uncharacterized protein LOC113678531
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113678531
Enzymes [BR:
pdam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
113678531
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
113678531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Helicase_C
DEAD
ResIII
RIG-I_C-RD
SWI2_SNF2
NTP_transf_2
Polbeta
AAA_22
T2SSE
Motif
Other DBs
NCBI-GeneID:
113678531
NCBI-ProteinID:
XP_027051224
LinkDB
All DBs
Position
Unknown
AA seq
2787 aa
AA seq
DB search
MAYRGCLTLYCGHCNTGLATVDILMLATVPPSATHMAIKKEKEEEAYKTLRKIPNPDAKK
ASFSPYKILCKQCNDYVGTVSIVHENTLICFKIENVYFKKGYEEIRGKRLKHIKDKLLRY
GLEVVNISQLQLPDAIEQNETPSEPLIYCDVRNSLTTEQVLSFTKQIPRGYQQEMFLEAL
RGNTLVYLPTGSGKTLIAAMVLSCMKKLNPNKLMVFLVDRIPLVYQQSDYIKSQVPDLRV
EILAGDVGRFPGDKSRWIATVQALAENKIDLLVLTHQILLNLMASDPVVVRMSDISVLVF
DEAHHCLGNHCYNQVMRDFYRVTSNRFKPLVLALTASPAGADTLQATSKKLEELLSNLSA
CGRMPSRSTDLEVYWNRPDTEYQMVPLNTKQTVFESNVELYLNSLKELIECEAKCPRALD
KLQVLKHNYRGALRKLIERCYGDKSRVKGLALGEHAMHMLSVIEVNNILGNEYAVECLEE
CIKQLRMATSPLERLKKKLVGSLNALKVLESSIKDLRRVSSFFALSDRYQHLTKELENFI
LRVEKDETSRGIIFVKMRRTAHKLCERLRKETEICEKLNPAFLVGHGRGSDGMDWRGEQE
EILKKLRSGEVKLLVSTSVLEEGLDVPVCNLVIRFDSALTVRGIVQSRGRASRRPDSRFV
VICSDCKEQTNAFDAIKMENNMECAMRLQQYSTARLQAESFGCEMKRPDLSQQSHSVEPP
SMACAEEEPQAEEEDDDVENEYSVEAMTIHERGESLASGGPRKRRKKRVPNVRIAIFNVV
TDRNNNKEVSQLTEYFEKYFDVKSLSPETSEVVKDAESLAGEESTSDQSHSVILRLQLEP
CEDQIFRKKEKFFTHIVQSWCSRPKAYRSETEKHWLCRDEPSQSQKYSKQVLVIKAEAIN
LGYFWNRAHFCIHWPFNSTKLMENIRVAFQHDLRTLLICFTMANPFSKWKADLYKLQIRY
SELREFVLVDKRSSSSSQEVIISLRHPPRIYRAKNLIKKEQDDEENDFEDWYFDENDYDF
DFDDDRGFSSEYSSDSEDDRTTSGVNRSSAESTQVKSEDDTEALLTSSDLARIDDVVNWE
RVTEIGDSGEAFGLCFAYNFTFKASEWQHVKEVLKSIARYDKKSFFVSMRKSLRRLPEVN
ISKELPFVVKYAAQCVLSSFPFARGRITTKFATLLRSKPEKTTLSALERLGTALHQNLFC
DPEAQLEALLNQTNLNLGGFPKQLLPDQCAMIKRMVITPTRLLYYTPEIMSKNRVLRNYN
TDQFLCVNFRDEDFSRLSSAAGAIDNILERLRRILDSGVIAGGDRFLFLGSSNSQLRNHG
CWFVRPSPQPEEIRNWMGDFSRISCVATFMARMGQCFSTSMDAVGIDLSEGTDWEMDNDI
KTPDGSYCFSDGVGRISESLARQVAKKIAKTFLPSAIQVRFAGCKGVLTLDPRLPDNIAV
FRPSMRKFESSHRRIEVLQTSRPQAVFLNHQLIILLSNLGIPDDVFMKLQRDMLDRLAGM
LVNEQLASQQMTSGAKTGIAYTSLSQAGIQLTTEPFFKSLLVALYKERMQNLLSRARILL
PPAEARLMIGVMDETGTLKPGEVFAQYSATSNDPDHEGEFSKSKKHILKGPVVITRNPCL
HPGDVRQLTAVYAAQLVHLVDCVVFPNHGPRPHPSEMAGGDLDGDLYFVCWNKELLPKRK
LFPPMNYEAPPKKIVQGPIQIHHMTEFVAEYIRFDQLGVIDNAHKAHADCDEGGVESSLC
LKLAELHSLAVDAPKTGEWPEMPKEAKVLKFPDFMMKSDKPSYPSDKVLGKLYRECRAFK
DSIGREVPRKKPHIDSALLVPHFQRYQDEAKELYEEYSNQLQTLMNLYGIETEAELLSGC
FLKVHSRLGREKVEIADLVGQILTKIRESFRRRFFREFEVNEDIRGAEDVISEEMRRKAS
AWYYVAYSNKQSTDAAENVPDGTPSKQFLSFPWLVDDVMLSIRTERAFEEQESPSIVESI
NESVLKVFEKDRRILLPCFEERLQKKNLIAREIPGMSLALFGSSATLLFRTDSDLDLCVL
NSVRVARRKGLDREEQIALLTKLHPIMKNLFKHARLVESAKVPVISCQNPSNYGGPLVKV
TGDLSASWEGLLKAIVLSSYIRSYPGLLPVLRLLLSWGHVTGLAGHGVEAGIKSNELTFL
LLMFCASKNLVQNFNMESVWERCLQISTGQVSDIVLIQEWRDVLASLPSLESSENEASVP
ITLGDEEIGEILLTFFQAYNSTLEAEIPQPFASLLGVAKLSELLDAEHLRLLKEHMQRAF
HLLALYGDVEVLLTISASEIDRVIFLSEELSYAMAGSERHNAYELSKKTGARVTIRPSLP
GSGFGLVLQAIGTESAVASVERALNAMATQALRNRAAIMSVCFVKEAKLMVIEGSLSDDD
RITLVPYYGNHHPTHDSLALYVPMLINPRSDLRRIGAAFTRYEFQSFKEKFLTQVQVIER
DFVPSIHGEMELAVHFGRIYVLNIPKSFTEDTESPTVSVFQTNLSRGYKPRPSVLSTTPR
NDKKYVKTLKSRKVKKRKNNEVGEDGKKAPNRKPSRSSFFTIVTSHEKIMGFLMQRGFLE
EKSSEFYLVEIHTDHEFCVLTDGAFNFLEIMYPKLRWCAVDVKRSWRENPEDHDITDLDG
VETDVRFLLQTRHALRSEDIRGTAYEQYRDTLQPQHSAQASRCPYVVKPEVWKEVALIRH
KKSRIYKLSEDLAMQSEFRKALRISVNEVTEYSRPTKHVSDFSKVMTRWEVVTKAGLPNS
WSNSEAVEKLLRDIWAFAFALASHLSE
NT seq
8364 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaggggttgccttaccctgtactgcggtcactgcaacacagggctggctacc
gtggatattttaatgttagctacagttcctccatcagcgacgcatatggccattaagaaa
gagaaggaagaagaagcctacaaaacacttagaaagattccaaaccctgacgctaaaaaa
gcctctttttctccttacaaaattctttgcaaacagtgcaatgattacgtaggtacagtc
agcattgtacacgaaaacaccctgatttgtttcaagattgaaaacgtatatttcaaaaag
gggtatgaggaaatcagagggaaacgattgaagcacattaaagacaaacttttgcggtat
ggccttgaggttgttaatatttctcagctacaacttccagatgctattgaacagaatgaa
actccttcagagccgttgatttattgcgatgtacggaacagcctaactacggagcaagtc
ttgtcttttacgaagcagatcccgcgcggatatcaacaagaaatgtttctggaagccttg
cgcggaaacacgctggtctaccttcccacgggctcgggcaagactttaattgcagccatg
gtgctgagctgtatgaagaaactaaacccaaacaaattgatggtgttcttggtggaccgc
ataccacttgtgtaccaacagagtgactacatcaagtcccaggttccagatctcagagtg
gagatattagcgggagatgttggacgtttcccgggcgataagtcgcgttggatagccacc
gttcaggcgctggcagagaataaaatcgatctcctggttttgacccaccagattttgtta
aaccttatggccagtgatcctgtggtggtgcgcatgtctgatatttctgttctcgttttc
gacgaggcccatcattgccttggaaatcattgctacaatcaggtcatgagagatttctac
agggtcacaagtaacaggtttaagcctctagtgctggcgctgactgcctctccagcaggc
gccgatacactccaggctacgtcgaaaaagttggaggaacttctgtcgaacctatccgca
tgtgggcgcatgccttctcggtctacagacctagaggtgtactggaaccgaccggataca
gaatatcagatggttcctcttaacaccaagcaaacagtatttgaatcaaacgtggagttg
tacctcaactccttgaaagagcttatcgaatgtgaagccaaatgtcctcgagcgcttgac
aagttgcaagttctaaaacacaactaccgcggtgctttgcgtaagttgattgaacgttgc
tatggtgacaagagccgcgtaaagggcttggcgcttggggaacatgccatgcacatgctc
agtgtgattgaagtgaacaacatcttggggaacgagtatgctgtggagtgtcttgaagag
tgcattaaacagcttcgaatggccacatcccctttggaacggctcaagaagaagctcgtt
ggttccttaaatgcgctaaaggttctagaatcgtcgatcaaagacctcagacgagtttca
agctttttcgcactcagcgacaggtatcaacacctcaccaaggaacttgaaaattttatt
cttcgagttgaaaaagacgaaacttccagagggatcatttttgtcaaaatgaggaggact
gcccacaagctctgtgaacggctacggaaagaaactgaaatttgcgaaaaattgaaccca
gccttcctcgtcggtcatgggcggggaagcgatggaatggactggagaggagaacaagag
gaaatcctcaagaagttacgatctggggaagttaaattacttgtcagcacgagcgtttta
gaggagggactggacgtaccagtgtgtaacctggtcatccgctttgacagcgcactgact
gtacggggaatagtgcagagtcgcgggcgagcatctcgcagacccgacagccgatttgtc
gtcatctgcagtgattgcaaagagcaaacgaacgcgttcgatgctatcaaaatggaaaac
aacatggaatgtgcaatgaggttgcaacaatattccacagcacgattacaggcagagtca
ttcggttgtgagatgaagagaccagacttgagccaacagtcacattcagttgaaccgccg
agcatggcatgcgcagaagaggaaccacaagctgaggaagaggatgatgacgtggaaaat
gaatacagcgtcgaagcaatgaccatccatgaacgaggagaaagtctagcatcaggagga
cccagaaagagaagaaagaagcgtgttccaaatgtacgtatcgctattttcaatgttgtc
acagatagaaacaacaacaaggaagttagccaactaacagaatacttcgagaaatatttt
gatgtgaagtccttgtcgccagaaacctctgaagttgttaaagatgctgagagtttagca
ggggaggagagcacttcggaccaaagtcactcagtcattcttcgcctacagttagagcct
tgtgaagaccaaattttccgcaaaaaagaaaaattctttactcatatcgttcagtcgtgg
tgttcgcgtcccaaagcgtatcgatctgaaacggagaagcactggttatgtcgagatgag
ccctcacagagtcaaaagtattccaaacaggtgcttgtcatcaaagcagaagccatcaat
ctggggtacttttggaatcgagcgcatttctgtattcactggcctttcaactccaccaag
ctgatggaaaacattcgcgttgcgtttcagcatgatctgcgaacattgttgatctgtttt
acaatggctaatccattcagtaaatggaaagcagacctgtacaagctgcaaatacgttac
agcgaactgagagaatttgttttggtggacaaacggagctcatcttcgtctcaagaggta
ataatctccctgaggcatcctccacgcatctatagagcgaagaatttaatcaagaaagag
caggatgacgaagaaaacgactttgaagattggtacttcgatgagaacgactacgacttc
gattttgatgacgatcgtggcttctccagcgagtactcgagcgattccgaagatgatcga
acgacttccggagtcaaccgcagtagtgccgaaagtactcaagtgaagtccgaagatgat
accgaagctcttttgacgagttcggatctcgcgcgaattgacgacgtggtgaattgggag
cgtgttacagaaatcggagacagcggggaagcttttggtttgtgcttcgcctacaacttt
acctttaaggcgagtgaatggcaacatgtcaaagaggtacttaaaagcattgctagatat
gacaagaagtcgttctttgtttctatgcgcaaatctttgagacgattaccagaggtgaac
atttccaaggagttaccttttgtcgtcaaatacgccgcgcaatgtgttctgagttccttc
ccattcgccaggggtagaatcacgaccaagttcgccactttgcttagaagtaaacctgaa
aaaacaacattgtctgccttggaaagacttggcacggctctccatcagaatttattctgc
gatccagaggcccaactcgaagccttgctcaaccaaacaaatttgaatctagggggattc
ccaaagcaactgctacccgatcagtgcgccatgataaaacggatggtgattacacccaca
aggctcctttactacacaccagagatcatgtccaaaaatcgtgtccttcgcaattacaac
acagaccagtttttgtgtgtgaactttcgtgatgaagacttctcgaggctctcatccgca
gctggagccattgataacattttagaacgtttgaggcggatcttggacagcggagtgatc
gcaggcggggatagattcctttttttgggatcttccaatagtcagttgcgcaatcacggc
tgctggtttgttcgtcccagtcctcagccagaggagataagaaattggatgggagacttt
tctagaataagctgtgttgccacattcatggcgcgaatgggtcagtgcttttcgacatcc
atggacgcagttggtatcgacctcagtgaagggaccgattgggaaatggataacgacatt
aaaacaccggatggtagctactgcttctccgatggtgtgggaagaatttcagaatctctt
gctcgccaggtcgccaagaagatagccaagacctttttgccttccgcaatccaagttcgc
tttgctggatgtaaaggagttctaacacttgatcccaggcttccagacaacatagcggtc
ttccgcccgagcatgcgcaagtttgaaagctcccatcgacggattgaagtgctacagacc
tctcgtccccaggccgttttcttgaatcaccagttgattattcttttgtcgaatctcggt
atcccggatgatgtattcatgaaattacagcgtgatatgttggaccgattggcaggaatg
cttgtaaacgaacagctggcttctcagcagatgacttcgggggccaaaactggcatcgct
tacacgagcctgtctcaagctggaatacaactgactactgaacccttttttaagtctttg
ttggtagcactgtacaaagagcgaatgcaaaatctgcttagtcgagcccgcattctcctt
ccaccagcggaggctcgacttatgataggtgtcatggatgagacggggaccttaaagcca
ggcgaggtatttgcacagtattcagcgacttccaatgaccctgatcacgaaggagaattc
agtaaatcaaaaaagcatatcctcaaaggaccggtagtgataacaagaaatccttgtctc
catcccggggatgtcagacagctgaccgcagtatacgcggctcaactcgttcatttggtg
gactgtgtcgtgtttcctaatcatggaccacgccctcatccgagtgaaatggcaggtgga
gatctcgatggcgacctgtactttgtctgctggaataaagagcttttgccgaagagaaaa
ctttttccaccaatgaattacgaagcaccacctaaaaaaatagtccaaggaccaattcaa
atacatcacatgaccgaatttgtagccgaatatatccggtttgaccagcttggtgtgatt
gacaacgcacataaagcacatgccgattgtgacgagggaggggtcgagtcgtcactatgt
cttaaattagctgagcttcattcattagcagttgacgctccaaagacgggggaatggccc
gaaatgcccaaagaggcgaaagtcttaaagtttcctgatttcatgatgaaatccgacaaa
cccagctacccttcagacaaggttttgggaaagctttatcgggagtgcagagcatttaaa
gacagtatagggagagaggttccacgaaagaaaccacacatcgactccgctttattagtg
ccccatttccagaggtaccaagacgaagcaaaggagctgtatgaggaatactccaaccag
ctacaaacgctgatgaacctctacggaattgagacagaagccgagctgctctcaggatgt
tttcttaaagtacactctcgtcttggaagagaaaaagtcgagattgctgacctagttggg
caaattctcactaaaatacgcgaaagctttcggagaaggttcttcagagagttcgaagtg
aacgaagatattcgaggagccgaagatgttatttccgaagaaatgcgaagaaaggcctcg
gcctggtactacgtggcgtacagcaacaagcaatcgaccgacgcagcagaaaatgtcccg
gatggaaccccttcaaagcagttcttaagctttccgtggctggttgatgacgttatgctg
tcaatcagaacagaaagagcatttgaggaacaggagtctccaagcatcgtagagtcgatt
aatgaaagcgttttgaaggtctttgagaaagacagaagaattctcttgccgtgttttgaa
gaaagacttcagaaaaagaatctcattgctagagaaattcctggaatgagtcttgcttta
ttcggttcttcagcgacacttctcttcagaacagattcggatcttgatctttgtgtgcta
aattctgtgcgcgtcgcgcgacgaaaaggattggatcgagaggaacagatcgccttattg
acgaaattacacccaatcatgaagaacctgtttaagcatgcgcgtctggtggagtccgct
aaggttccagtgatttcttgccagaacccgtccaattatgggggtcccttggttaaagta
acaggtgatctctcagcctcatgggaaggtctcctcaaagctattgtgttatccagctac
ataagatcatacccaggtctcttgccagttctccgtctcctcctcagttggggtcatgtg
acggggctcgcaggacatggtgttgaggcagggattaagtcaaatgagctaactttcttg
ttgctgatgttctgcgcttccaagaatttggtgcaaaatttcaacatggaaagtgtctgg
gaaaggtgcttacagatttcaactggacaagtgagcgacatagttcttatccaggagtgg
cgagatgttcttgcatctttaccgtcattggaatcctcagaaaacgaggccagtgttcca
atcactctcggtgatgaagaaatcggtgagatcctgctgacttttttccaagcttacaac
tccaccctcgaagcagaaattcctcaaccatttgcgtcactattaggcgtggccaaacta
tcagaactgttggacgcagaacacttgcgcctgctcaaggagcacatgcaacgtgctttt
catctgttggcactttacggcgacgttgaagtgcttcttacaatcagtgcatcagaaatc
gaccgtgttattttcctgtcagaggagttgtcatatgccatggcgggctcagaaaggcat
aacgcgtatgagttgtcgaaaaagactggtgcgagagtaacaattcgtcccagtctcccc
gggtcaggatttggtcttgttcttcaagctattggtactgagtctgctgtagcgtcagta
gagcgagcattgaatgccatggcaacgcaagctttgcgtaacagggctgccattatgtca
gtttgcttcgttaaggaagccaaactcatggtgatagaaggttctcttagtgacgatgac
cgcatcactttggtgccgtactacggaaatcaccaccccacccatgatagtctggctttg
tacgtgcccatgctgataaatccaagatctgaccttaggcgtataggagctgcctttacc
cggtatgagttccaaagctttaaggagaagtttctcactcaagttcaggtgatagagagg
gattttgtgccttccattcacggtgaaatggagttagccgttcactttggacgcatttat
gttttaaatattccgaaatcatttactgaggacacagaatcgccaactgttagtgtgttc
caaacaaatctgtcacgtggttacaaacctagacctagtgtgctctccaccactcctaga
aatgacaaaaagtacgtcaagactctaaaaagtcgaaaagttaagaagcgaaagaacaac
gaagtcggggaggatggcaaaaaggcaccaaaccggaaaccctctcgaagctctttcttt
acaatcgttacatcgcatgagaaaatcatgggttttctgatgcagcgcgggtttttagag
gaaaaaagctcagagttctacctggttgaaatacacacggatcacgaattctgtgttctc
acagatggagctttcaattttctcgaaatcatgtatcccaagctgcgctggtgtgcggta
gatgtgaagaggtcttggcgggaaaatcccgaagatcatgacatcactgatctagacgga
gtcgagactgatgtccgtttcttattacagacccgccatgcactgcgctcagaggacata
cgtggaactgcttatgaacagtaccgtgataccttgcagcctcaacattccgcacaggct
tcccgatgtccttatgtagttaaaccggaagtttggaaggaggtggccttgattcgacac
aaaaagtcccggatatacaagctgagcgaagacttagcaatgcaaagcgagtttaggaaa
gcccttcgtatcagtgtgaacgaagttactgagtattctcgacccacaaaacacgtatct
gacttcagtaaagttatgacacgatgggaagttgtcaccaaggctggattacccaacagt
tggagtaatagcgaagctgtggagaagctattgagggatatctgggcctttgcttttgct
ttggcctcgcatttatccgaataa
DBGET
integrated database retrieval system
