Pocillopora damicornis (lace coral): 113683499
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Entry
113683499 CDS
T05773
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03022
Basal transcription factors
pdam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113683499
09124 Replication and repair
03420 Nucleotide excision repair
113683499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113683499
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113683499
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113683499
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113683499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
113683499
NCBI-ProteinID:
XP_027056549
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MANEEESGGYRWLNQYERTWEVIQEDAEGSLQTVVDEISHRTKRRRVMGRSGNIRLGMMR
HLFIIVDMSRAMEEADLKPSRLACSVKLLETFVTEYFDQNPISQIGIIVTRNKRAEKLTE
LSGNPQVHIGTLQKAAAKPCQGEPSLQNAMESAVQSLRHMPGHASREILILFGSLTSCDP
GDVLETVHTLQQQNIRCSIIGLAAEVRVCRTVCAETQGSYGVILDERHYRELLMQHVTPP
VAKTDTEAALIRMGFPQHLSSGPPSLCMCHLDSNGVKGLSTSGYFCPQCKSKYCDLPVEC
KVCGLTLVSAPHLARSYQHLFPLPQFTETDLSTPMDGQSLPRHNYCFACQRAFTEQTIYS
CPQCAQFFCMECDIFIHDSLHSCPGCTASPQGEG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaggaggaatcaggaggttatcgctggttaaatcagtacgaaagaacgtgg
gaagttattcaagaagatgctgaaggttctcttcaaacagtggtggatgaaatttcacac
aggaccaaaagaaggagagttatgggaagaagtggtaacattcgacttgggatgatgagg
cacttgtttatcattgtggatatgtccagagcaatggaagaagcagatttaaaaccttca
cgccttgcatgttctgtcaagctcttggaaacttttgtcactgagtactttgatcagaat
cctatttcacagattggaattattgtgaccagaaacaagagagctgagaaactcacagaa
ctgagtggtaatccacaagttcacattggcactctccaaaaagctgctgctaaaccttgc
caaggagaaccatcactgcagaatgccatggaatctgctgttcagtcgctgagacatatg
cctggccatgccagtcgtgaaatacttattctgtttggaagccttacatcatgtgaccca
ggagatgtcttggagactgttcatactcttcagcaacaaaatataaggtgttctatcata
ggcttggctgcggaagtacgtgtttgtagaacagtttgtgctgaaacacaagggagttat
ggtgttattctggatgagagacattaccgtgaattattaatgcagcatgttacaccacct
gtggctaagactgatacagaagctgctttgattcgaatgggtttccctcagcatctttcg
agcggaccaccatccttgtgcatgtgtcatttggatagtaatggtgttaaaggacttagc
acatcaggatacttctgtccgcagtgtaagagcaagtactgtgacctgcccgtagagtgc
aaagtttgtggtctaacgcttgtgtctgctcctcatttggctcgttcgtatcagcactta
ttcccgcttcctcagttcactgaaacagatttgtcaactcctatggatggacaaagctta
cccagacacaattattgcttcgcctgccaaagagcgtttacagaacaaacgatatattct
tgccctcaatgtgcacagttcttttgcatggaatgcgacatctttatccacgactccctc
cacagctgtcccgggtgtactgcctccccacaaggggagggttag
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