Pocillopora damicornis (lace coral): 113684202
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Entry
113684202 CDS
T05773
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113684202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113684202
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113684202
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113684202
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113684202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-C2H2_10
zf-CCHC_2
zf-CCCH_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
113684202
NCBI-ProteinID:
XP_027057339
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MEDIVASVADLKFEIEMQLYNQVGVQPLPFPGMDKSGAAVCEFFMRNMCNRGPVCPFRHT
KGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECQYLHIDPESK
IKDCPWYDRGFCKHGPSCRHRHVRRVICLNYMCGFCPEGPKCKHMHPRFELPVKDESSEK
KAMNIVCHYCNQPGHKASSCPSNPHKENYKNQQGMHQNINVNIVPVTTNSHLDTDRPMMR
RPLETVTCFKCGDKGHYANKCPKSRSELIGL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgtggcgagtgtagcagacctcaagtttgaaattgagatgcaattgtac
aaccaagttggagttcagcctcttccgttcccgggcatggacaagtctggtgcagcagtg
tgtgaattttttatgaggaacatgtgcaatcgagggccagtttgtccttttagacacacc
aaaggtgaaaagacagttgtctgtaagcactggctgagagggctttgtaaaaagggtgat
caatgcgaatttcttcacgaatatgacatgacaaaaatgcccgaatgttatttttattcc
aagtttggtgaatgtagtaacaaagaatgccaataccttcacattgatcctgagtctaag
ataaaggactgtccatggtatgacagaggattctgcaagcatggtccaagctgtaggcat
cgacatgtgaggagagttatttgcctgaactacatgtgtgggttttgtcctgaaggtcct
aagtgtaaacatatgcatccaagatttgagcttcctgtgaaagatgaaagcagcgagaaa
aaagccatgaacattgtatgtcattactgtaatcagcctggtcacaaagcatccagctgt
ccatcaaatccccacaaagaaaactataagaatcaacaagggatgcatcaaaatatcaat
gtaaatatcgttccagtgacaacaaattcacatttggatactgatcgacccatgatgaga
aggcctctagaaacagtcacttgtttcaagtgtggggacaaagggcactatgcaaacaag
tgtcctaaatcaagatcagagttaattggattatga
DBGET
integrated database retrieval system
