Pocillopora damicornis (lace coral): 113686652
Help
Entry
113686652 CDS
T05773
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113686652
09122 Translation
03013 Nucleocytoplasmic transport
113686652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113686652
03041 Spliceosome [BR:
pdam03041
]
113686652
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113686652
Spliceosome [BR:
pdam03041
]
Complex C
Other components
EJC/TREX
113686652
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113686652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
DUF4894
Motif
Other DBs
NCBI-GeneID:
113686652
NCBI-ProteinID:
XP_027060099
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MSQFNYENTTTYTKQTTAELKDKAIGGEMEVDGQEAGELTTSTVPIDFNLYKKFWALQDY
FRNPTQCYTTLAWKTFTQYTKEVLNVFRSVKLEHVTWKKKAKEFKDLQGSDSKDLARYFA
KFLTNEKLLDLQLSDSNFRRTILVQMLIIYQYLAGNVKFKSTNQVLSESQSTWIKDATSQ
VYELLRETPPDGDKFAKTVEHILEREENWISWKNEGCPSFIKDRSQDEVAPKPSRKRKVS
LGEEMASGWKSKKVLMGSNELTRLWNLCPDNLEACKADNRVFLPTLEEYFSEAIEQADPA
AMVEEEYKVTKNSNFGWRALRLLARRSHHFFQPSTNPFKTLPDYLESVVQQLAQELPNLK
TEEGIVVNGTSDSAVPIT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttaattatgaaaacaccacaacatatacaaaacaaacaactgctgaactg
aaggacaaagctattggaggtgaaatggaagtagatggccaggaagctggggaattaaca
acaagtactgtcccaattgacttcaacctgtataagaaattttgggcattacaagattat
ttccgtaatcccactcagtgttacactactttggcctggaaaacattcacacagtataca
aaagaagttctaaatgtgtttagaagtgtcaagttggagcatgttacatggaaaaagaaa
gcaaaggaatttaaagatctccagggaagtgacagcaaagatctggctcgctattttgcc
aagtttcttactaacgagaagctccttgatcttcaactaagtgacagtaacttcaggaga
actatccttgtacaaatgttaataatatatcagtaccttgctggtaatgtcaagtttaaa
agcacaaaccaagtcctgagtgagtctcaatccacgtggatcaaagatgcaacatctcaa
gtatatgaattgttgagagaaacaccacctgatggtgataaatttgcgaaaactgtcgag
catatcctagaaagagaagaaaactggatatcatggaagaacgaagggtgtccaagtttc
attaaagacagaagccaagatgaagtggcacccaaaccctcaagaaagcgtaaagtcagt
cttggggaagagatggcctcaggttggaaatccaaaaaagtgctcatgggaagcaatgag
ttgactcgtctttggaatttatgcccggacaatttggaggcttgcaaagccgataacaga
gtttttctcccaactcttgaggaatatttttcggaggccatagagcaagctgatccagcc
gctatggtggaagaggagtacaaggttacaaaaaacagtaactttggttggcgagcattg
cgtctcctcgctcgtagaagccatcactttttccagccaagcaccaacccgttcaaaacg
cttccagactaccttgaaagtgttgtacaacaacttgcgcaagaattaccgaacttaaag
actgaggaaggcatcgtggttaatggaacctcggactcagccgtgcctatcacgtga
DBGET
integrated database retrieval system