KEGG   Pocillopora damicornis (lace coral): 113686652
Entry
113686652         CDS       T05773                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03013  Nucleocytoplasmic transport
pdam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113686652
  09122 Translation
   03013 Nucleocytoplasmic transport
    113686652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113686652
   03041 Spliceosome [BR:pdam03041]
    113686652
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113686652
Spliceosome [BR:pdam03041]
 Complex C
  Other components
   EJC/TREX
    113686652
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113686652
SSDB
Motif
Pfam: efThoc1 DUF4894
Other DBs
NCBI-GeneID: 113686652
NCBI-ProteinID: XP_027060099
LinkDB
Position
Unknown
AA seq 378 aa
MSQFNYENTTTYTKQTTAELKDKAIGGEMEVDGQEAGELTTSTVPIDFNLYKKFWALQDY
FRNPTQCYTTLAWKTFTQYTKEVLNVFRSVKLEHVTWKKKAKEFKDLQGSDSKDLARYFA
KFLTNEKLLDLQLSDSNFRRTILVQMLIIYQYLAGNVKFKSTNQVLSESQSTWIKDATSQ
VYELLRETPPDGDKFAKTVEHILEREENWISWKNEGCPSFIKDRSQDEVAPKPSRKRKVS
LGEEMASGWKSKKVLMGSNELTRLWNLCPDNLEACKADNRVFLPTLEEYFSEAIEQADPA
AMVEEEYKVTKNSNFGWRALRLLARRSHHFFQPSTNPFKTLPDYLESVVQQLAQELPNLK
TEEGIVVNGTSDSAVPIT
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgagtcagtttaattatgaaaacaccacaacatatacaaaacaaacaactgctgaactg
aaggacaaagctattggaggtgaaatggaagtagatggccaggaagctggggaattaaca
acaagtactgtcccaattgacttcaacctgtataagaaattttgggcattacaagattat
ttccgtaatcccactcagtgttacactactttggcctggaaaacattcacacagtataca
aaagaagttctaaatgtgtttagaagtgtcaagttggagcatgttacatggaaaaagaaa
gcaaaggaatttaaagatctccagggaagtgacagcaaagatctggctcgctattttgcc
aagtttcttactaacgagaagctccttgatcttcaactaagtgacagtaacttcaggaga
actatccttgtacaaatgttaataatatatcagtaccttgctggtaatgtcaagtttaaa
agcacaaaccaagtcctgagtgagtctcaatccacgtggatcaaagatgcaacatctcaa
gtatatgaattgttgagagaaacaccacctgatggtgataaatttgcgaaaactgtcgag
catatcctagaaagagaagaaaactggatatcatggaagaacgaagggtgtccaagtttc
attaaagacagaagccaagatgaagtggcacccaaaccctcaagaaagcgtaaagtcagt
cttggggaagagatggcctcaggttggaaatccaaaaaagtgctcatgggaagcaatgag
ttgactcgtctttggaatttatgcccggacaatttggaggcttgcaaagccgataacaga
gtttttctcccaactcttgaggaatatttttcggaggccatagagcaagctgatccagcc
gctatggtggaagaggagtacaaggttacaaaaaacagtaactttggttggcgagcattg
cgtctcctcgctcgtagaagccatcactttttccagccaagcaccaacccgttcaaaacg
cttccagactaccttgaaagtgttgtacaacaacttgcgcaagaattaccgaacttaaag
actgaggaaggcatcgtggttaatggaacctcggactcagccgtgcctatcacgtga

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