Clostridioides difficile 630: CDIF630_00569
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Entry
CDIF630_00569 CDS
T03885
Name
(GenBank) transcriptional regulator, sigma-54-dependent
KO
K06714
arginine utilization regulatory protein
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdc03000
]
CDIF630_00569
Transcription factors [BR:
pdc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CDIF630_00569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
AAA_3
PAS_4
Mg_chelatase
PAS
UPF0175
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AJP10136
LinkDB
All DBs
Position
529679..531052
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AA seq
457 aa
AA seq
DB search
MNEILENIDEGVHFVNKDGKTIIYNNSVQKMEKMNRHDILTNSFFDIVNKMKINRSTLLE
VLEKREVIKDNIQKYLDKNGKEITAINTTIPIDIKGEFVGALEISKNMTTIENLLNRNYK
KNLVNKVSSRQKKGYEFDDILGESNLIKEAIAKSKKACKSDASVFIYGETGTGKELFSQS
IHYGSNRRNYPFIAQNCAALPESLFEGILFGTSKGGFTGAIDRPGLFEQANKGTLLLDEI
NSMPIMLQAKLLRVLQEGYVRRVGGTKDIPIDVRIIATTNESPKVILNEHKMRKDLYYRL
NIIHIKIPPLRDRKEDIPLLCKKFISKYNKKLNKKVVGISDEAIKILKNYDWQGNIRELE
NIIYCTMSMMEDEVQIETSMINLNDYYNLKENKESNNYSLNDLEDKTLSKIISEIEEKYI
YESLEKASYNITKAASILGMNRQNLQYKIKKYNIKIL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatattggaaaatattgatgaaggggtacattttgttaataaagacgggaaa
actataatctacaataattctgtacaaaaaatggaaaaaatgaacagacacgatatttta
accaattcattttttgatatagtcaacaaaatgaaaataaacaggagtacactattagaa
gttttggaaaaaagggaagttatcaaagacaatattcaaaaatatctggataaaaatgga
aaagagataacagcaattaatactacaataccaattgatattaaaggcgagtttgtaggg
gcacttgaaatatcaaagaatatgacaacgatagaaaatttactaaacagaaattataaa
aaaaatttagtcaataaagttagtagtagacaaaaaaagggttatgaatttgatgatatt
ttaggggaaagtaatttgattaaagaagcaatagctaaatctaagaaagcttgcaagtct
gatgcttcagtatttatatacggtgaaactggaacgggtaaagagttatttagccagtcc
attcactatggaagtaataggagaaactatccatttatagcacaaaattgtgcagctttg
ccggaatcactattcgaaggtatcctttttggaactagcaagggaggatttacaggagca
atagataggccaggtttatttgaacaagctaacaaagggacattgttattggatgagata
aattccatgcctattatgttacaggctaaactattaagggttttacaagaaggttatgta
agaagggttggaggaactaaggatatacctatagatgtaagaattattgcaacgacaaat
gaaagtccaaaggtaattttaaacgagcataaaatgcgaaaagatttatattataggctt
aacataattcatataaaaattcctcctcttagagatagaaaagaggacatacctctattg
tgcaaaaaatttatttcaaagtataataaaaagttaaataaaaaagtggtaggaatttca
gatgaagctattaaaattttaaaaaattacgattggcaaggtaacataagagagctagaa
aacataatttattgtactatgagtatgatggaagatgaggtacaaatagaaacaagtatg
attaatctaaacgactattacaatcttaaagagaataaagagagtaacaattattcttta
aacgatttggaggacaaaacacttagtaagattatcagtgagatagaagaaaagtatata
tatgaatcattagaaaaggcatcttacaatataactaaagctgcatcaattttaggtatg
aataggcaaaatttacagtataaaataaaaaaatataatatcaaaatattataa
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