Clostridioides difficile 630: CDIF630_00627
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Entry
CDIF630_00627 CDS
T03885
Symbol
dacF1
Name
(GenBank) serine-type D-ala-D-ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00550
Peptidoglycan biosynthesis
pdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDIF630_00627 (dacF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdc01002
]
CDIF630_00627 (dacF1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdc01011
]
CDIF630_00627 (dacF1)
Enzymes [BR:
pdc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CDIF630_00627 (dacF1)
Peptidases and inhibitors [BR:
pdc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CDIF630_00627 (dacF1)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CDIF630_00627 (dacF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Lactamase_B_3
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AJP10193
UniProt:
Q188W3
LinkDB
All DBs
Position
complement(597567..598796)
Genome browser
AA seq
409 aa
AA seq
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MKGKIKQLTILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLA
SLSKMMTFLLAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLV
SGNDAAIAIAKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENM
STAHDIVTLGKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYT
DNAGYCLAFSMMVPKDAKNERNHRLIGVVLGDGNKKNRISSSATLLKYGKDNFHSKKIAH
KGDIIETPCVDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVGVAKY
YNDSGKFVGSVDVKSESNIGCIPLKDKIKIKVAKINKKLEIKNSVCFKA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaaaaataaaacagttaacaatacttgcattaatttttatatttataactcct
gtatttgcatttgcagatactccaccagtaccaaattcttcaagagcagcactacttata
gaccaggaaactaaaagaatattatttgaaaaaaacattgatgaaaaaatgccattagcg
agtttaagtaaaatgatgacctttttattggcaatagaagcagttgataaaaatcaagtt
aaagagactgatatggtgaaaatagacaagtctacagcttcagtaggaggttctacttgt
aaacttaaagatggtgatgaaatatctctaggagagcttatgcagggtctaatgctagta
tctggaaatgatgctgctatagccatagctaaacatattggtaaaactgaaaagaatttt
gtaaatatgatgaacaagaaagcagaagaaataggaatgattgatacgtattattttaat
ccaaatgggcttcctatatatactgacccagaacataaagaacctcctattgaaaatatg
tcaactgctcacgatatagttacacttggaaagtatatgtacgaccattatgaaaatcaa
gttacaagaataaccactatgcaagtatataatgatactaaaaaggattttacacattat
aacacaaatcccttacttgtttcagtacctggtgttgatggaataaagacaggatataca
gataatgctggatattgccttgcattttctatgatggtacctaaagatgctaaaaacgaa
agaaatcatagattgataggtgttgtacttggtgatggtaacaagaaaaatagaatttct
tcttccgctactttattgaaatatggtaaagataatttccattctaaaaagatagcacat
aagggtgatattatagagactccttgtgttgatggtattgatgattttaagataacagtt
aaggttgataaagatttgtatggtgttgtttcagataacgagaatatcaatcctaaggta
gtgtttaaaaatatgaattatcctatccataagggagatattgttggtgttgcaaagtat
tataatgactctggtaaatttgttggaagtgttgatgtaaaaagtgaaagtaatatagga
tgtattcctttgaaggataagattaagattaaggttgctaagataaataaaaaacttgag
attaaaaattctgtttgttttaaagcatag
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