Clostridioides difficile 630: CDIF630_02839
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Entry
CDIF630_02839 CDS
T03885
Symbol
priA
Name
(GenBank) primosomal protein n'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDIF630_02839 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_02839 (priA)
Enzymes [BR:
pdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDIF630_02839 (priA)
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDIF630_02839 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
PriA_CRR
AAA_19
AAA_11
PIF1
AAA_22
AAA_30
MetW
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AJP12334
UniProt:
Q182S5
LinkDB
All DBs
Position
complement(2974561..2977050)
Genome browser
AA seq
829 aa
AA seq
DB search
MKKYAKVIVRSNTIYTDNLFTYQIPVFLSDVIKIGHRILVPFGKGNKPTEAFVFQFTDSL
DEKIKIKEIIDILDENPIFRKEDLELVYWMKNRYLCTYIECINLIYPKGYKLNNYKVVLL
GESLSGLNDIELKEKISTLSDKNREIVEKVIDSKGKIKVDKLKYIPNLNSSLYTMNKNGI
IKLCWEYKNHKNEKKVCYISLSLESDKIDDYIEQNKINVGSKQKEILSFLKNNENVEIND
LLDLLNASKQSINSLSKKKLITLEFKDYYREPKSIYKSVLKSIKLNNEQQEAVDEIKSNM
FVDDKKTYLIHGVTGSGKTEVYMEIIEFALNQGLDSIFLVPEIALTPQTIDRLKIRFGDL
VGVFHSKLSEGEKHDVYKAVKAGKVRVLIGARSALFAPFNSLGLIIIDECHESSYKSEKN
PKFNAIEVARFMALKNNITLILGSATPSIEEYYRAKSGEYKLINIKSRANDKPLPNIEVV
DMKDELDKGNRSIFSMKLQKEIRYAIEENNQVILFLNRRGYANFVSCRKCGYVFQCENCD
ISLTYHKKSNTGRCHYCGYEKEIPKECPECKSTYVKPFGVGTQKIEEELKYIFPDIKTLR
MDKDTTSKKGALDEILNKFKDKEADVLIGTQMLSKGLDFENVTLVGILSADMILNFPDFK
SFETTFQLITQVSGRAGRADKEGKVVLQTYDTEHYAIKHAIEYDYEGFYEDEIKIRKAFG
YSPFNNMLSVVVSGEDERLVIKNIKNMHASLIYLLEKRGINDLGFILGPNPCSISKINQN
YRWQILFKDENIEINLLKGIIKYICITKRDLIFDKNINVSIDINPNSVL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatgcaaaggtaatagttagaagtaatactatatatacagataatttattt
acatatcaaattcctgtatttttatctgatgtaataaaaattgggcacagaatattagta
ccatttggaaaaggtaataaaccaacagaagcctttgtatttcaatttacagatagctta
gatgaaaaaataaaaataaaagaaattattgatatattagatgaaaatccaatatttaga
aaagaagatttagagttggtttattggatgaaaaatagatatttgtgtacttatatagaa
tgtataaatttgatatatccaaagggatacaaattaaataattataaagtagtcctatta
ggtgaaagtttaagtggattaaatgatattgaattgaaggaaaaaatatcaactttaagt
gataaaaatagagaaatagtagagaaagtgattgatagtaaaggtaaaattaaggttgat
aagttaaaatatataccaaacttaaatagttctttgtacacaatgaataaaaatggaatt
ataaaattatgttgggaatataaaaatcacaaaaatgaaaagaaagtatgttatatatct
ttgagtttagaaagtgataagattgacgattatatagagcaaaataaaataaatgtggga
agtaaacaaaaagagatattaagttttcttaaaaataatgaaaatgtagagataaatgat
ttattggatttattaaatgcttcaaaacaaagtataaattctctaagtaagaaaaagcta
ataaccctagaatttaaggattattatagagagccaaaaagtatttacaaatccgtacta
aaaagtataaaattaaacaatgagcaacaagaagcagttgatgagataaagtcgaatatg
tttgtagatgataaaaaaacatacttaattcatggagtaactggaagtggaaaaactgaa
gtttacatggaaataatagaatttgctctaaatcaaggcttagacagtatattcttagta
cctgagatagcattaactcctcaaacaatagataggctaaagattaggtttggagattta
gttggagtgttccacagtaaactatctgaaggagaaaaacatgatgtttacaaagctgtc
aaagcaggtaaagtaagagtgttaattggagctaggtcagctttatttgcaccttttaat
tccttaggcttaataataattgatgaatgtcatgagtcatcatataagtctgagaagaat
ccaaaatttaatgctatagaagttgctagatttatggcattaaaaaataatataactctt
attttaggttcagcaacgccctcaattgaagagtattatagggcaaaatctggagaatac
aaacttataaatataaaaagtagagcaaatgataagcctcttccaaacattgaagttgta
gacatgaaagatgagttagataaaggaaatagaagtatatttagtatgaaattacaaaaa
gaaatacgttatgcgattgaagaaaataatcaagtaatactatttttaaacagaagaggt
tatgcaaattttgtatcttgtagaaagtgtggatatgtgtttcaatgtgaaaattgtgat
atatctttaacttatcataagaaaagcaatactggaagatgccactattgtggatatgag
aaagaaattccaaaagagtgtcctgaatgtaaaagtacttatgttaagccatttggagtt
ggaactcaaaaaattgaagaggaattaaaatatatttttccagatataaaaactttgaga
atggataaagatacaacttcaaaaaaaggtgctttagatgagatattaaataaatttaaa
gataaagaagcagatgtactgattggaacacagatgttaagtaaagggctggattttgag
aatgtaactttagtaggtattttgtctgcagacatgatattaaattttccagactttaaa
agttttgaaactacatttcaattgataactcaagtctctggaagagcagggagagctgat
aaagagggaaaagtagtacttcagacttatgacactgaacactatgctattaagcatgct
attgaatatgattatgagggtttttatgaagatgagataaaaataagaaaagcatttgga
tattctccttttaataatatgttaagtgtagttgttagtggtgaagatgaaagattagtg
ataaaaaatataaaaaatatgcatgcatcattgatttatttattagaaaaaaggggtata
aatgatttaggatttatattaggtccaaatccatgttcaatatcaaaaataaatcaaaat
tatagatggcaaatactctttaaagatgaaaatattgaaattaatctcttaaagggtata
ataaaatatatatgtataacaaaacgagatttgatatttgataagaatatcaatgtatct
atagatattaatccaaacagtgtattataa
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