Paracoccus denitrificans: Pden_0515
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Entry
Pden_0515 CDS
T00440
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00260
Glycine, serine and threonine metabolism
pde01100
Metabolic pathways
Module
pde_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pden_0515
Enzymes [BR:
pde01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Pden_0515
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Pden_0515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
FAD_binding_2
DAO
Thi4
HI0933_like
GIDA
Pyr_redox
Pyr_redox_3
AlaDh_PNT_C
Amino_oxidase
Lycopene_cycl
FAD_binding_3
Xre_MbcA_ParS_C
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABL68627
UniProt:
A1AZD3
LinkDB
All DBs
Position
1:484673..487606
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AA seq
977 aa
AA seq
DB search
MTETGPFRLPRGGRLIDRAYQLPFRFDGRQMRGVAGDTLASALLANGQLMMGRSFKYHRP
RGPIASGAEEPNALLGLGQGGRFEPNQRATTTPLVGGMVTASQNAWPSLNADIGAINNWL
YRFFPAGFYYKTFMHPRPFWKHVFEPIIRRSAGLGKAPTEADPDKYEQAYAHVDVVVVGG
GIAGLTAARDAARDGKSVWLVEQTPHFGGRTPTDHADGQARVDALLAELQGMANVTLRRS
TQATGLYDHGYLLVRESLADHDPNAGIPRQRLWRIRAGHVVVATGALERPLSFAGNDVPG
VILASAVRDYINDYGVAPGRRIVVVTNNDDAYRTALVALDAGLDVAAVIDARSTAEGALP
AAVRARGVRVLTGSAIAGVKGGHGVEAVKLCAHSGSGQVTETIDADCVAMSGGWSPVVHL
WSHCGGKLNWSDAQSMFAPDPNRPPTGADGKAMASCVGAAAGDLLVPELTGAQAESATMP
VWVMPAHAPRKMKFKMWLDFQNDVKVSDVELAAQEGYHSVEHTKRYTTLGMATDQGKVSN
INGLAVLSNALNQPIPATGTTTFRPPYTPLTLGTIAGEARGEIFQPLRKTPMHGWHEAQG
AFFEPVGHWRRPYCYPKGSESHGDAVAREIRAVRASVGTLDASTLGKIIVKGPDAGRYLD
MMYTGMMSSLPIGKCRYGLICSENGFLIDDGVAARLSEDTWLVHTTTGGAERMHGHFEDW
LQCEWWDWKVWTANVTEQWAQVAVVGPKARVLLERLGGKIDLSPEALPFMGWIEGEIAGI
PARVYRISFSGELSFEVAVPANRGLELWEKLHEAGRDLNVTPYGTEAMHVMRAEKGFIMI
GDETDGTVIPQDLGMSWAISKKKADYIGKRAQERSFMTDPGRWKLVGLESLDGRVLPDGV
YAVDQGANANGQRKVQGRVTSTYMSPTLDRPIAMGLVRQGPERMGEVLEFPVAGQESYKA
RIVDPVFYDKEGSRANG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagactggaccctttcgcctgccgcgcggcggccgcctgatcgaccgcgcctat
cagttgccctttcgcttcgacggccgccagatgcgcggggtcgcgggcgatacgcttgcc
tcggccttgctggcgaacggccagctgatgatgggccgcagcttcaagtatcaccgcccg
cgcggccccatcgcctcgggtgccgaagagccgaacgcgctgctcggcctgggtcagggc
ggccggttcgagccgaaccagcgcgccaccaccacgccgctggtcggcggcatggtcacc
gccagccagaacgcctggcccagcctgaacgccgatatcggcgcgatcaacaactggctc
tatcgctttttcccggcggggttctactataagaccttcatgcatccgcgcccgttctgg
aagcatgtgttcgagccgatcatccgccgctcggccggcctgggcaaggcgccgaccgag
gccgacccggacaaatacgaacaggcctatgcccatgtggatgtcgtggtggtcggcggc
ggcatcgccgggctgaccgcggcgcgcgacgcggcccgcgacggcaagtcggtctggctg
gtcgagcagaccccgcatttcggcggccgcacccccaccgaccatgccgacggccaggcc
cgcgtcgacgcgttgctggcggaactgcagggcatggccaacgtcaccctgcgccgctcg
acccaggcgacggggctttacgaccatggctatctgctggtgcgggaatcgctggccgat
cacgacccgaacgccggcattccgcgccagcgcctgtggcgcatccgcgccggccatgtg
gtcgtcgccaccggcgcgctggaacggccgctgagctttgccggcaacgacgtgccgggc
gtgatcctggcctcggccgtgcgcgactacatcaacgattacggcgtcgcgccgggccgc
aggatcgtcgtggtgaccaataacgacgacgcctatcgcaccgcgctggtggcgctggat
gcggggctggacgtggccgcggtgatcgatgcccgcagcacggccgagggtgcattgccc
gcggcggtgcgcgcgcggggcgtgcgcgtgctgaccggcagcgccatcgccggcgtcaag
ggcggccacggcgtcgaggcggtcaagctttgcgcgcattccggctcgggtcaggtcacc
gagaccatcgatgccgattgcgtcgccatgtccggcggctggtccccggtggtgcatctg
tggagccattgcggcggcaagctgaactggtccgacgcgcagtcgatgttcgccccggac
ccgaaccgcccgccgaccggcgcggacggcaaggcgatggcaagctgcgtgggtgcggcg
gcgggcgacctgctggtcccggaactgaccggcgcgcaggcggaatcggccaccatgccg
gtctgggtcatgccggcccacgccccgcgcaagatgaaattcaagatgtggctcgacttc
cagaacgacgtgaaggtctcggatgtcgaactggccgcgcaggaaggctatcacagcgtc
gagcataccaagcgctacaccacgctgggcatggcgaccgaccagggaaaggtaagcaat
atcaatggactcgccgttctgtccaatgcgctgaaccagccgatcccggccacgggcacg
acgaccttccgcccgccctatacgccgctgaccctgggcaccatcgccggcgaggcgcgg
ggcgagatcttccagcccttgcgcaagacgcccatgcatggctggcacgaagcgcagggc
gcgttcttcgagccggtcggccattggcgccgcccctattgctatccgaagggcagcgaa
agccatggcgacgcggtggcgcgcgagatccgggcggtgcgcgcctcggtcgggacgctc
gacgcctcgacgctgggcaagatcatcgtcaaaggacccgatgcgggcaggtacctcgac
atgatgtataccggcatgatgtccagcctgcccatcggcaagtgccgctatggcctgatc
tgcagcgagaacggctttctcatcgacgacggcgtggccgcgcggctgtccgaggacacc
tggcttgtccacaccaccaccggcggcgccgagcgcatgcacggccatttcgaggactgg
ctgcaatgcgaatggtgggactggaaggtctggaccgccaacgtcaccgagcaatgggcg
caggtcgccgtggtcggccccaaggcccgcgtgctgctggaacggctgggcggcaagatc
gacctttcgcccgaggcgctgcccttcatgggctggatcgagggcgagatcgccggcatc
cccgcccgcgtctatcgcatcagcttttcgggcgagctcagcttcgaggtggcggtgccc
gcgaaccggggcctggagctttgggaaaagctgcatgaggccggccgcgacctgaacgtc
accccctacggcaccgaggccatgcacgtcatgcgcgccgaaaaggggttcatcatgatc
ggcgacgaaaccgacggcacggtgatcccgcaggatctgggcatgtcctgggcgatcagc
aagaagaaggccgactatatcggcaagcgcgcgcaagagcgcagcttcatgaccgatccc
ggccgctggaagctggtgggcctggaaagcctggatggacgggtgctgcccgacggcgtc
tatgcggtcgatcagggcgcgaatgccaacggccagcgcaaggtgcagggccgcgtgacc
tcgacctacatgtcgccgaccctggaccggcccatcgccatggggctggtgcggcagggc
cccgagcgcatgggcgaggtgctggagttccccgtcgcgggtcaggaaagctacaaggcg
cggatcgtcgatccggtcttctacgacaaggaagggagccgggcgaatggctga
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