Pseudomonas denitrificans (nom. rej.): F1C79_02965
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Entry
F1C79_02965 CDS
T09478
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
pden
Pseudomonas denitrificans (nom. rej.)
Pathway
pden00630
Glyoxylate and dicarboxylate metabolism
pden01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pden00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F1C79_02965 (gcl)
Enzymes [BR:
pden01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
F1C79_02965 (gcl)
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Gene cluster
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Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
DUF3950
Motif
Other DBs
NCBI-ProteinID:
QEY70697
UniProt:
A0A9X7MVX5
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Position
complement(603033..604808)
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AA seq
591 aa
AA seq
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MARMRAIEAAVLVMRREGVDTAFGVPGAAINPMYAAMKKLGGIDHVLARHVEGASHMAEG
YTRTNAGNIGVCIGTSGPAGTDMVTGLYSASADSIPILCITGQAPRARMHKEDFQAVDIT
SIVKPVTKWATTVLEPGQVPYAFQKAFFEMRSGRPGPVLIDLPFDVQMAEIEFDIDAYEP
LPVNKPKATRAQAEKALALFNDAERPLICAGGGIINADASDKLVEFAELTGVPVVPTLMG
WGTIPDDHPLMAGMCGLQTSHRYGNATVLESDMVLGIGNRWANRHTGSVDVYTAGRKFVH
VDIEPTQIGRVFTPDLGIVSDAGSALDVFLEVAREWKAAGKLKDRSAWVEACRERKRTMQ
RKTHFDNVPVKPQRVYEEMNEFFGKDTCYVSTIGLSQIAGAQFLHVYKPRHWINCGQAGP
LGWTIPAALGVVKADPSRQVVALSGDYDFQFMIEELAAGAQFNLPYIHVLVNNSYLGLIR
QAQRGFEIDYCVQLAFDNVNAPELNGYGVDHVAVVEGLGCKAIRVFDPNQIGAAFAQARE
LMQQHRVPVVVEVILERVTNISMGTEINAVNEFEELALKGVDAPTAISLLD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatgagagcaatcgaggctgccgtactcgtcatgcgtcgcgaaggcgtggat
accgccttcggcgtaccgggcgccgccatcaaccccatgtatgcggccatgaagaaactc
ggtggcatcgatcacgtcctggcccgccacgtggaaggcgcctcgcacatggccgagggc
tacacccgcaccaacgccggcaacatcggcgtgtgcatcggcacctccggccccgccggc
accgacatggtcaccggcctgtactcggcttccgccgactccatcccgatcctctgcatc
accggccaggctccccgtgcgcgcatgcacaaggaagacttccaggccgtggacatcacc
agcatcgtcaaaccggtcaccaagtgggcaaccaccgtgctggagccgggccaggtgccc
tatgccttccagaaggccttcttcgaaatgcgcagcggccgtcccggcccggtgctgatc
gacctgcccttcgacgtgcagatggccgagatcgaattcgacatcgacgcctacgaaccg
ctgccggtgaacaagcccaaggccactcgtgcccaagccgagaaagccctggccctgttc
aatgacgccgagcgtccgctgatctgcgccggcggcggcatcatcaacgccgacgcctcc
gacaagctggtggaattcgccgagctgaccggcgtgccggtcgtcccgaccctgatgggc
tggggcaccatccccgacgaccacccgctgatggccggtatgtgcggcctgcagacttcg
caccgctacggcaacgccaccgtcctggaatcggacatggtgctgggcatcggcaaccgc
tgggccaaccgtcacaccggttcggtcgacgtctataccgctggccgcaagttcgtccat
gtggacatcgaaccgacccagatcggccgtgtgttcaccccggacttagggatagtttcc
gacgccggttccgccctcgacgtgttcctcgaagtagcccgcgagtggaaagccgccggc
aagctgaaggaccgcagcgcctgggtcgaagcctgccgcgaacgcaagcgcacgatgcag
cgcaagacccacttcgacaacgtgccggtcaagccgcagcgcgtctacgaagagatgaac
gagttcttcggcaaggacacctgctacgtcagcaccatcggtctgtcgcagatcgccggc
gcgcagttcctgcacgtctacaagccgcgccactggatcaactgcggccaggccggcccg
ctgggctggaccattccggcagcgctgggcgtggtcaaggccgacccgagccgtcaggtc
gtcgcgctgtcgggcgactatgacttccagttcatgatcgaagaactggccgccggtgcg
cagttcaacctgccgtatatccacgtgctggtgaacaactcctacctcggcctgatccgc
caggcgcagcgcggcttcgagatcgactactgcgtgcagctggccttcgacaacgtcaac
gctccggagctcaacggctacggtgtggaccacgtcgcggtggtggaaggtctgggttgc
aaggcgatccgcgttttcgacccgaaccagatcggcgccgccttcgcccaggctcgcgag
ctgatgcagcagcaccgtgtaccggtggtggtcgaggtcatcctggagcgcgtcaccaac
atctccatgggtaccgagatcaacgcggtcaacgagttcgaagagctggccctgaaaggc
gttgatgcgccgaccgccatctcgctgctggactga
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