Clostridioides difficile 630Derm: CD630DERM_28310
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Entry
CD630DERM_28310 CDS
T03785
Name
(GenBank) putative adhesin
Organism
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Clostridioides difficile 630Derm
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Gene cluster
GFIT
Motif
Pfam:
SpaA
Collagen_bind
DUF11
EURL
Big_8
Motif
Other DBs
NCBI-ProteinID:
CEJ99461
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All DBs
Position
1:complement(3260958..3263876)
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AA seq
972 aa
AA seq
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MKKGNRKALLISLIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSTGEEKESDNKKP
EQTPEKDKATDNKKPEQTPEEEKPTDNKKPEQTPEEDKSTDNKKPEQTPEGEKPIDNKKP
EQIPEEDKSTDNKKSEQALEDEKPLDNKNTEKTPEEDNLLEDENLLKVLEEELNEENEDY
GFVVKINNNTIETESMKKISFNLTYTPTSKGIQAGDSITFKVPDVFNKVNLDYTSECFDK
TESNGEYTLTFRELPNGQSVMQGKIGLEAYVKKVDEDTNAKIHIETTGKIESGSGDIDVE
IKPGDKTDVPDAKGTLKKLVEGKKSTTVFMPVKNKDINYSIQVNEKQEELKDIILYDELP
EGLTLINGSVSVVTSDGKEVSDFNIEQSKNSISVNFGNIDKSYTVKYKARISDKNAKHGN
KYKNVARIESDGKKIQEDDATVSIFDRGDDYLLTKGHSGATNITQVGQVINYQISINDDK
SPISNVVITDNIPEGMRLTTSGEAGHDFRVVEIPMNGSWTPWSKEKIANNISYKVEEKRN
ESGQVDKVITGFTINLSKEEVESKFFIAYTLKVISIEDSYINRAVLDANNSEIDKNDEIN
FKKNSGLISAKKEVDKKVLNSSDNQIVKYKINMSTYGVYDAGQVNLLDEVNSVLEISNIK
YSDNLELKKEAGDGKNTIRLVNKYEFKQIKEGEPVQSWVTFDANFTNVKVGETIRNVAQI
NGSSPPGVETTKQGYAFEAKKVDALDKNVLSGAKFNLEDAFGNIVVKDLVSDEDGIIQSS
VKNPGTYYLVEIMAPRGYEKLKDKIKVEIGNKDIGRIVDIGNIENIRQENPPVNPPAPPN
TDEPIVNPPVPPSTDKPRKPSSSSDTEDTIVINPPVPPSEDIINPPIPEVLNPPVPPSEE
MIETPVKQIIPIPEVVKPSVSEEKNNKVKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIV
GLIVLRRNKNTN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaaatagaaaggcattattaattagtttaattatgattttaagtatggtg
gtgtctacaatatatccaactgtatcttatgcttcagaattaggagagaatagtcagatt
caaagtggttcaactaattcatcaactggagaggagaaggaaagcgacaataaaaagcca
gaacagactccagagaaagataaggcaacagataataaaaaaccagaacagaccccagag
gaagaaaaaccaacagataataaaaaaccagaacagaccccagaagaagataagtcaaca
gataataaaaagccagagcaaactccagaaggagaaaagccaatagataataaaaagcca
gagcagataccagaagaagataagtcaacagataataaaaagtcagaacaagctttagaa
gatgaaaaaccactagacaataaaaatacagaaaaaactccagaggaagataatctatta
gaagatgaaaatttattgaaagttttagaagaagaacttaatgaagaaaatgaagactat
ggatttgttgtaaaaattaataacaatacaatagaaacggaatcaatgaaaaaaatatca
tttaatttaacttatactccaacatcaaaaggaatacaagcaggagattcaataactttt
aaggtgccagatgtattcaataaagttaatttagattatacaagtgaatgctttgataaa
acagaaagtaatggagagtatacacttacatttagagaattacctaatggccaaagtgta
atgcaaggtaaaataggtttggaagcatatgttaaaaaggttgatgaagatactaatgca
aaaatacatattgaaactactggaaaaatagaaagtggaagtggagatatagatgtagaa
ataaaacctggagataaaacggatgttccagatgctaaaggaacacttaaaaagcttgtt
gaaggaaaaaaatcaactactgtatttatgccagttaaaaataaagatataaattacagt
atacaagtaaatgaaaagcaggaagagttaaaagatattattttgtatgatgagcttcct
gaaggattgacattgataaatggttctgtaagtgtagtaacaagtgatggaaaagaagtt
agtgattttaatattgaacagagtaaaaattctatttcagttaattttggaaatatagat
aaatcgtatactgttaagtataaggctagaatcagtgacaaaaatgcaaaacatggtaat
aaatataagaatgtagctaggattgaatctgatggtaagaagatacaagaagatgatgct
actgtaagtatatttgatagaggagatgattatcttcttactaaaggacattcaggagca
acaaatattactcaagttggtcaagtaataaactatcagatttcaataaatgatgataaa
tcaccaataagtaatgttgttataacagataatataccagaaggcatgagattaactact
tcaggagaagctgggcatgattttagagttgtagaaattccaatgaatgggagctggact
ccttggagtaaagaaaaaattgccaataatatttcatataaagtagaagaaaaaagaaat
gaaagtgggcaagtagataaagttataactggatttacaattaatctcagtaaagaagaa
gtggaatcaaagttttttatagcttatacattaaaggtaattagtattgaagatagctat
ataaatagagctgttcttgatgcaaataatagtgaaattgataaaaatgatgagataaac
tttaagaaaaattctggattaataagcgcaaaaaaagaagttgataaaaaagttttaaac
agtagtgataaccagattgttaaatacaaaatcaatatgtcaacttatggagtttatgat
gcaggacaagtaaatcttttagatgaagtaaactcagttctagaaatatctaatataaaa
tattctgataatcttgaacttaaaaaagaagctggagatggaaaaaatacaataagatta
gtaaataaatacgaatttaaacagataaaagaaggggaacctgtgcaaagttgggttaca
tttgatgcaaacttcacaaatgtaaaagttggggagactatacgaaatgtggctcagatt
aatggttcaagtcctccaggagtagagactactaagcaaggttatgcttttgaagctaaa
aaagtggatgctttagataaaaatgtactttcaggtgctaagttcaatttagaagatgca
tttggaaatatagtagttaaggatttagtcagtgatgaagatggtataattcaatctagt
gtaaaaaacccaggaacatattatttagtggagataatggctccacgtggatatgaaaaa
ctgaaggataaaattaaggttgaaattggtaataaagatattggtagaatagtggatatt
ggaaatatagaaaacataagacaagaaaatccaccagtaaatccaccagcaccaccaaat
acagatgaaccaatagtaaatccaccagtaccaccaagcacagataaaccaaggaaacca
tcaagttcatctgatacagaggatactatagttataaatccaccagtaccaccatcagaa
gatataataaatccgccaataccagaggtattgaatcctccagtaccaccatcagaagag
atgatagaaactcctgttaaacagattattccaataccagaagtagtaaagccatcagtg
tcagaagaaaaaaataataaagttaaagatgatactttggtaaatccaccagtaccacca
aaaacaggggatagtactacaattattggagaaatacttttagttataggagctattgta
ggacttatcgtattaagaagaaataaaaatacaaattag
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