Planococcus donghaensis: BCM40_12440
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Entry
BCM40_12440 CDS
T04451
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCM40_12440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_12440
Enzymes [BR:
pdg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BCM40_12440
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCM40_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANU24111
UniProt:
A0A1C7EKF6
LinkDB
All DBs
Position
complement(756401..756907)
Genome browser
AA seq
168 aa
AA seq
DB search
MQLEPIPDHLQKDLNILFVGFNPSIRSSETGFHYANPNNRFWKILYEAGLTPRKYRPEEN
RELLKLGFGLTNIVARPTKEAAEISKDEYVKGAEMLKEKIRQYRPKTVCFVGKGVYQQFS
KRKSVSWGIQQEPVIPGVIEYVAPSSSGLVRMKFYDIVEIYSGLNNYR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactagagccgattcctgatcatttgcaaaaagacttgaacatcttgtttgttgga
tttaatccgagcatccgttcttctgaaaccggttttcattacgctaatccaaacaaccgg
ttttggaaaattctctatgaagctggattaactccacgaaaataccgacctgaagaaaat
cgtgaactgctaaagctggggtttggtttaacaaatatcgtggcacgcccaactaaagaa
gcagcggaaatttccaaagacgaatacgtaaaaggtgctgagatgttgaaagaaaaaatc
aggcagtatcgtccaaaaactgtttgttttgtgggcaaaggtgtgtatcagcaatttagt
aaaagaaaatccgtatcatggggcatccaacaagaacccgttattccaggtgttatcgaa
tacgtcgccccttcctcgagcggtttagtacgtatgaaattttatgacattgttgaaatt
tacagcggcttgaataactatcgttaa
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