Paenibacillus donghaensis: B9T62_07520
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Entry
B9T62_07520 CDS
T04971
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9T62_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdh03019
]
B9T62_07520
03009 Ribosome biogenesis [BR:
pdh03009
]
B9T62_07520
Enzymes [BR:
pdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9T62_07520
Messenger RNA biogenesis [BR:
pdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9T62_07520
Ribosome biogenesis [BR:
pdh03009
]
Prokaryotic type
rRNA helicases
B9T62_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ASA20654
UniProt:
A0A2Z2K6U8
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All DBs
Position
1790095..1791762
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AA seq
555 aa
AA seq
DB search
MKTFAEFGLEPKVLQAILELGFEEATPIQEQSLPFALAGSDLIGQAQTGTGKTAAFGIPL
ISKIDREDEKILALIMTPTRELAIQVAEEIGKLARFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDITSILKLVPEERQTML
FSATMPSNIQRLAQQFLKNPQHVSVIPKQISAPLIDQAYVEVPERQKFEALSRLIDMESP
DLAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREIDHMHLIERVTR
SKITRKPLPTMAEAIEGKQRITAERVLGMVESDELNEYKGMAIQLLEQYDSVQLLSAAMK
LLTGDKKDSQIELTPEDPIRAKRRGGKNDIRSGRKPSGSYGANRSGSGSSGGYKGNRDSS
TGGGYKGNRDSSTGGGSRGGYSSNYGGGSGSGGYGGGYKGNRDSASTGGSADRKPAARPS
SSTSTRPAKREDYDI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaatttggtttggagcctaaggtgttgcaggcgattttagaactg
ggatttgaggaagcaacacccatccaggagcaatccttgcctttcgcactggccggatcg
gaccttattggccaggcacagacaggtacaggcaaaactgccgcttttggtattcccctc
atctccaagattgaccgtgaggacgagaagatccttgcactaatcatgaccccaacccgt
gagcttgctattcaggtagctgaagaaatcggcaagctggcccgcttcaaaggccttcgt
tcactcgctatctacggtggacaggatattggccgccagatccgcggtttgaagaagaaa
ccgcagattatcattggtacccctggacgtctgcttgaccacatcaaccgcaagaccatc
cgtctggatgatgtacagaccgttgttctggatgaagcggatgaaatgctggacatgggc
ttcatggaagatatcacttccatcctgaagctggttccggaagaacgtcaaaccatgctg
ttctcggcaaccatgccttcgaacattcagcgtctggcacagcaattcctgaagaaccct
cagcatgtatcggttattcctaagcaaatcagtgcaccgttgatcgatcaggcttatgtg
gaagttcctgaacgtcagaagtttgaagcgctcagccgtctgattgatatggagtcccct
gatctggcgatcgtctttggccgcaccaagcgccgggtagatgaattggctgaagctctg
cagaagcgcggctattcagctgatggcctgcatggtgacctgtcccagaatcagcgtgat
gcggttatgcgcaagttccgcgatggcagcattgatgtgctggttgccactgacgttgca
gcacgtggtttggacgtttcgggtgtcacccatgtaatcaactttgaccttccgcaggat
ccagagagttatgttcaccgtatcggccgtaccggccgcgctggcaaggaaggtacagcc
tggtctttcgtgactccgcgcgaaatcgatcatatgcacctgattgaacgggttacccgt
tccaagattacccgcaaaccgctgccaaccatggcggaagctattgaaggcaagcaacgc
atcactgcagaacgtgtgcttggcatggttgaaagtgatgaattgaacgaatacaaaggt
atggctattcaattgctggagcaatacgactccgtgcagctgctctccgcagcgatgaag
ttgcttaccggcgacaagaaagattcccagatcgaattgactccggaagatccaatccgt
gcaaagcgccgcggcggcaagaacgatattcgcagcggacgcaagcctagcggcagctat
ggcgccaatcgcagtggttccggcagctccggcggctacaagggcaaccgcgatagcagc
actggcggcggctacaaaggcaatcgtgacagcagcaccggcggcggaagccgtggcggc
tacagctcgaattacggcggtgggagcggaagtggcggctatggcggtggctacaaaggc
aaccgtgatagcgcatctaccggtggcagtgctgaccgcaagcccgctgcacgtccaagc
agcagcaccagcacacgtccagctaaacgtgaagactacgatatctag
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