Phyllostomus discolor (pale spear-nosed bat): 114502959
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Entry
114502959 CDS
T07739
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114502959
Enzymes [BR:
pdic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114502959
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114502959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114502959
NCBI-ProteinID:
XP_035887876
UniProt:
A0A7E6E8B8
LinkDB
All DBs
Position
8:complement(28730898..28803418)
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AA seq
1809 aa
AA seq
DB search
MASAPPMSNETSSPSNSESESEGGSDAESDSCDDSETMESLSSFDQSEEEDHLSSEDIIK
KEPASGPLPCELEIDKEKPSDVEATGESSCDLGRSGLTECKKILRMLSLLIWKTVSKSQM
VSLLKDFVESEFFLIDGDSLFITCVSNVNLKKGQTLHFFYIVEQFLHDFIQKEAKFIIVF
FKDAEYLYFNHPELLALRTILIQHLEYNTDVPIHTQFSNCLTPEWEIFLKECYPYFLIVS
EEGLTPHQTDFLNIFIIHALQKKINIIQSLGIKSDALRIYGYYASSCYLHKCFFEMNEIS
LQHALHAYIVEHYQKSPEREIFLYGHLRLNLGEMQKEIHQALSLLHSLGPEGADVRSVVC
SVSCAVTLKLYAKMLHGAQDHENPSTGTEKQNMQDLKKTPTLNEVVDLCRMHCLSVTCLQ
HLPLFQRAKSRIIASAWDRTLLPFLRMLKYCEFFTLKQLKSRNNWNVNYGGLPDLTDNSL
CRNIAYYYEIEYSRGLTLELGETLKESYQKLWNTVLTASGDGDFGGPMPVRTTSRPFLTH
KETSPRGSNQEIHKLGLIPLKAEIVEDYAGDILSELPFLSSDDPAITSLSKKKEFDELIH
WHSSRPLSDDFERMMCRSGANSKDAKERREIQKLQCFYHLFGKSMIGSNRSVSVVRGRDL
PPPENSSVQKKKNHQTNAEKIIEENQKRQLAKLEKKEEERWNNLSEYIEKEIKENPNSGI
KRLEDFIQTCPVKSVKFAAEMVGLDACFKLWVEHCSKPEAVSGDINIIINLMKRIHIIHE
KHSELLQNTHRQKIAKYLKYIGFDNLAHLLCPQVQESGTKKDVSKYSVHMGAARFQLTYM
GPYLFREERSDPDPRVRHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKIL
RESDDGVVVYVAPTKALVNQVVGTVYSLFTKALPKGLTVCGVFTRDYRHDTYNCQVLVTV
PQCLEILLLSPRGQKWVKRIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISN
PEHLTEWLVLIKRYWQHVESTMENSGPSQNALKVAKKQQRKGVEKPSYRVRLVWYKERYN
DLEKYVCSLKDNDFIIEHYHPCAALTVKHLEKHGIPLDLGFSPRESILLYDAMVHVWPEW
TRMQELEPEEFSCFKNKIVIMRTDAKKYEEELKKEMIRWVQLDPSKVDQLLKYLKPQTFD
SAETEKQRMFPHFVEKLKEMNKLPAIFFSFNIHTVELSASRLLSNLRIKQNTHKDPNSET
EMKNLNRKLWKAMKSYKRNCAVFLNSDSDARIQRIIVLEAEIKEMKKNLKKYYAVPPGCN
YADHTVVDSQTLSKILYRLRGTRKSYQLYSLLSRGIGYHHGSMEYKQRQVVEMLFRLKHI
KVVTATSSLALGINMPCKSVVFMEDSVYLDALNFRQMSGRAGRRGEDLTGHVFFYDIPLP
KIERLLKSNVPKLKGQFPLSISLVLRLMLLVAKADDKEDAKAKALSVLQHSLMSFKQPKI
KHMLKFYFIYSLQFLVREEYLNQECIPIGYSGLVSHLHYHEPSNFVLVSFLKKGVFHKLC
IPTNTNGQKRFSEDVMETLVVVLANLFGRRYLPPCVNKFETKIPCSAVILDDLPQEFAEV
VEEHNNIIQKNFGSFLLTISKLADMRKECQLPLSEIDFSGKECEDSELVSHLMPGTESRT
AVSPFACLSNITDQDLFHIDVVNDAKLRTVDVDVTKVPFFCMTKYDMSGRKSPLNGYVMN
FYKNRSLSALTQDNWLNMGDAYHLLKDFALTVRSIRISLSELCDDEDDNVVLAFKQLSKA
FNEILGKKD
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacctcctatgtcaaatgaaacatcaagccctagtaacagtgagagtgag
agtgagggtgggagtgatgctgaaagtgacagctgtgacgacagtgagactatggagagc
ttgtcctcatttgatcagtctgaagaagaagatcatctaagctcagaagacataataaaa
aaagagccagcttctgggcctttgccatgtgagcttgaaatcgataaagagaaaccttct
gatgttgaagctacaggtgagagcagctgtgatttaggaagatcaggattaactgaatgt
aagaaaattctgaggatgctctcactattgatttggaaaactgtgtcaaaatctcaaatg
gtgagcttacttaaagactttgttgagtctgaattttttttgattgatggagattcacta
ttcatcacatgtgtttcaaatgtgaacttaaagaaaggacaaactcttcacttcttctat
attgtagaacagtttctacatgatttcattcaaaaggaagccaaatttataatagttttc
tttaaggatgcagaatatctgtattttaatcaccctgaacttctggctcttcgtaccata
ttgattcaacatttagaatacaatacggatgtccctattcatacacaattttccaactgt
ctgacaccagaatgggagatatttcttaaagaatgttatccgtatttcctaattgtctca
gaagagggactaacacctcatcaaacagactttttaaacatttttatcattcacgctctt
cagaagaaaatcaacattatacagtctttaggaataaagtcagatgcccttagaatttat
ggatactatgcctcaagttgctatttacacaaatgcttctttgaaatgaacgagatatca
ctgcaacatgccttacatgcctacatagtagagcactaccaaaagtcaccggaaagagaa
atatttctatatggtcatttgagactaaacttgggagaaatgcagaaagagatacatcaa
gccttgtccttgcttcacagtctgggccctgaaggagctgatgtgagaagtgttgtgtgc
tctgtttcatgtgctgtgacactaaaactctatgcaaaaatgttacatggtgcacaagac
catgagaacccaagcactggcacagaaaagcaaaacatgcaggacttgaagaaaacacca
acactaaatgaagtggtagatctttgcagaatgcactgtcttagtgtgacttgccttcaa
catttacccctgtttcaaagagctaagagtagaatcattgcttctgcttgggacagaact
cttttaccgtttctaagaatgttaaagtattgtgaatttttcaccctaaaacaactaaag
tctagaaataattggaatgtgaattacggtggcctacctgacttaactgataatagtttg
tgcagaaatattgcttattattatgaaattgaatatagtagaggactaaccctggaactg
ggtgaaacgttgaaagagagctatcagaagctgtggaacacggttttgacagcgtcaggg
gatggtgattttggaggacccatgcccgtgaggacaacatccaggccatttcttacacac
aaagaaacatcacctagaggatcaaatcaagaaattcataaattaggactcattcctctg
aaagcagaaattgtagaagattatgctggagatattttgtcagaactaccttttctaagc
agtgatgacccagctattacatctctttctaagaagaaagaatttgatgaactcatacac
tggcattcttctagaccgctcagtgatgattttgaaaggatgatgtgcaggagtggtgct
aattccaaagatgccaaagaacgaagggaaatacagaaattacagtgtttttatcacctc
tttggaaaatctatgatagggagtaacagatcagtaagtgttgtaagaggaagagatctt
ccacctccagaaaactcttcagtgcaaaagaaaaaaaaccaccagacgaatgcagaaaaa
attattgaagaaaatcaaaagagacagctagctaaactagagaaaaaagaggaagaaaga
tggaataacttgtctgaatatattgaaaaggaaattaaagaaaatcctaactctggaata
aaaagactagaagattttatccaaacatgccctgttaagtctgtaaaatttgctgcagaa
atggtaggattggatgcctgtttcaaattatgggtggaacactgttcaaaaccagaagca
gtatccggagatataaacataataattaacttgatgaaaaggattcacataattcatgaa
aaacattctgaactattacaaaatacacatcgacaaaaaatagccaaatatctaaaatat
attggatttgacaacttggcacacttactatgtcctcaggttcaggaatcaggtaccaag
aaggatgtttctaaatattctgttcacatgggggcggctcggtttcagttaacatacatg
ggcccctacttatttcgagaagaaagaagtgatccggatcccagagtgcgtcatttcata
ccggacacgtggcagagggaacttcttgatgttgtagataataatgaatctgctgtaatt
gttgccccgacttcgtcagggaaaacctatgcttcttactactgcatggagaaaatcctg
agagagagcgatgacggggtggttgtgtacgtggctccaaccaaggctcttgttaatcaa
gtggtaggaaccgtctacagtttatttaccaaagcactgccaaaaggattaacggtgtgt
ggagtttttacaagagattaccgtcatgacacctataattgtcaggtattggtgacagtg
cctcagtgtttggaaatactcttgctgtcacctcgtggtcagaagtgggtgaaaaggata
agatatgtcatatttgatgaggttcactgtcttgggggagaaattggagcagaagtctgg
gagcatctcctcgtcatgatccgatgtccctttctggctctctctgctaccatcagtaat
cctgagcatctcaccgaatggctggtgttaattaaaagatactggcaacatgttgaaagc
acaatggaaaattctggtccatcgcaaaatgccttgaaagttgccaagaaacaacaaaga
aaaggagtagaaaagccatcatacagagttagactagtatggtataaagaacgatacaat
gacctggaaaagtatgtgtgttccctaaaggataatgactttatcattgaacactatcac
ccatgtgctgcacttacagtcaagcatttagagaaacatggaatccctttagaccttgga
ttttctccacgggaaagcatactgctgtatgatgcaatggtacatgtttggccagaatgg
acaagaatgcaggagttagaacctgaagaattcagctgcttcaagaataaaatagtcatt
atgaggacagatgccaagaaatatgaagaggaactgaaaaaagaaatgattcgttgggtt
cagctggacccaagcaaggtggatcagttactaaagtaccttaagcctcaaacttttgac
agtgcagaaactgaaaagcaaagaatgtttccccattttgtggaaaaacttaaagaaatg
aataagctgcctgcaatattcttttcattcaacattcacacagtggaactatcagcttca
cgacttctttcaaatttgagaatcaaacagaatactcataaagacccaaattctgaaaca
gagatgaaaaatttgaataggaaattatggaaagcaatgaagtcttataaaagaaactgt
gctgtatttttaaattcagattcagatgctaggattcaaagaatcattgtattggaagct
gaaataaaggaaatgaagaaaaaccttaagaagtattatgcagtgcctccaggctgtaat
tatgccgaccatacagttgtggatagccagactttatcaaagatcttatacagactgaga
ggaacaagaaaaagctaccaactgtacagtctgttaagtcggggcattggatatcatcac
ggttcaatggaatataagcaaagacaagttgtggagatgcttttcagactgaagcacatc
aaggtagtaacagctacctcctcccttgctttgggaattaacatgccatgtaaatctgtt
gtttttatggaagattctgtttatttggatgccttgaactttcgacagatgtccggtcgt
gcaggaagacgtggagaagatctcacaggacacgtgttcttctatgacattccattacct
aagatagaaaggctcttaaagtcgaatgtgcccaaactgaagggtcagtttcctttaagc
atttccttggttctcagacttatgctcttagttgccaaagcagatgacaaagaggatgcc
aaagcaaaggcattatcagttctccaacattcactgatgtccttcaagcagccaaagatc
aagcacatgttaaagttttactttatatattctttgcaattcttggtcagagaggaatat
ttgaatcaagaatgtattcccattggatattccggacttgtgtctcatttgcactaccac
gaaccttccaactttgttttagtaagctttctgaagaaaggtgtatttcataagttgtgt
attccaaccaatacaaacggccaaaagagattttctgaagatgtgatggagaccttagtg
gtggtgttagcaaatctttttggaagacggtatcttcctccctgtgtgaacaaatttgaa
acgaaaattccttgttcagcggtaattctagatgatcttccccaggaatttgctgaagtg
gtagaggaacacaacaacataattcaaaagaattttggttccttcctcctaacaatttct
aagttggctgatatgagaaaagaatgccaactacctctctcagaaattgacttttcaggt
aaagaatgcgaagactctgaactggtctctcatttaatgcctggaactgagagcagaact
gctgtctccccatttgcttgcctgtccaacataactgatcaagatttatttcatatcgat
gtggtaaatgatgctaagttacgaacagttgatgtggatgtcacaaaagttccattcttt
tgcatgactaagtatgatatgagtggaaggaagtctccattgaatggttatgtaatgaat
ttctacaaaaaccgttccctgtcggcactcactcaggataactggttaaatatgggagat
gcttatcatttactcaaggatttcgcacttactgttcgatctatcaggatttcattgagt
gaattatgtgatgatgaagatgacaatgttgtgttagcatttaaacaactgagtaaagca
ttcaatgaaatcttaggaaaaaaagactga
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