Phyllostomus discolor (pale spear-nosed bat): 114506296
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Entry
114506296 CDS
T07739
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114506296 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
114506296 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114506296 (THOC1)
03041 Spliceosome [BR:
pdic03041
]
114506296 (THOC1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114506296 (THOC1)
Spliceosome [BR:
pdic03041
]
Complex C
Other components
EJC/TREX
114506296 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114506296 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
114506296
NCBI-ProteinID:
XP_028379719
EnsemblRapid:
ENSPDIG00005022749
UniProt:
A0A6J2MJQ7
LinkDB
All DBs
Position
9:complement(40047600..40096844)
Genome browser
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARSRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRVVRKRTAPE
DFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPESMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIETFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGVHATPENLINALHKSGLSDLVESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttacccgaagcgcggtcgcggtttacgaagtct
accagagaggccctaaacaacaaaaatatcaagccattgttgaataccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcttctacgccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactccgtatgtgc
aatgatctcttaagaagattgtcaaaatcccagaatacagtcttctgtggacgaattcaa
ctcttcttggccaggctttttcctttatctgaaaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagtacattgggtcag
aagcacactgaagatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccccgtgcagtgctatgagaagatttcgtggaaaactttt
ctcaagtattcagaagaagttctagctgttttcaagagttataaattagatgatacgcag
gcctcaagaaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcggcgacac
atcctattgcagtatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccacccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaaggacatccgatagcaagccaacgagagtagtacggaagaggacagcaccagag
gacttcctagggaaaggacccagcaaaaagattctgatgggaaatgaggagttaacaaga
ctttggaacctctgccctgataatatggaagcctgtaaatcagacacaagggaatatatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaagcatggtt
gaaaatgaatataaggctgtgaacaattcaaactatggttggagagccctgagactacta
gcacgaagaagccctcacttcttccagccaaccaaccagcagttcaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaagaaaatgaaagc
cctgatgttcggagagacaaacctgtaacaggggaacaaatagagacatttgccaacaaa
ttgggtgaacaatggaagattctggctccctacttggaaatgaaagactcggaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagccaggcagttactagttgcctgg
caagatcaagagggagtacatgcaacacccgagaacctgataaatgcactgcacaagtct
ggattaagtgaccttgtagagagtctaactaatgacaacgagacaaatagttag
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