Phyllostomus discolor (pale spear-nosed bat): 114508643
Help
Entry
114508643 CDS
T07739
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114508643 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114508643 (LIG4)
Enzymes [BR:
pdic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114508643 (LIG4)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114508643 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
114508643
NCBI-ProteinID:
XP_028382438
EnsemblRapid:
ENSPDIG00005016355
UniProt:
A0A6J2MWU8
LinkDB
All DBs
Position
11:complement(62907330..62915718)
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIRYFREFLDSWRRFHDALHKNQNDV
TDSFYPAMRLILPQLEREREAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGQLTIQQVNDILDSIASNNTARRKDLVKKSFLHLISKCSA
LEQKWLIRMIVKDLKLGVSQQTVFSIFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTD
QFGTSSQEGSLTPFIHNTFKTDIQMCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEYSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILSSIFTPIPGRIEIVQKTQAHTNKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPSSGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTDCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHFLVGGDDGPQEKKRKAAPKIKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGISSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTESCVPWQPHFMIHMCPSTKQHFAREYDCYGDSYFTDTDLNQLKEVFTG
IKSPSEQTPEEMASVIADLEYRYSWDCSPLSMFRHHTIYLDLYTVINDLNSKIEGTRLAI
TALELRFHGAKVVSYLAEGVSHVIIGKDHSRVADFKAFRRTLKRKFKILQEGWVTDSIDK
CELQEENEYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaagggcgtgcagataaaatcagatacttcagg
gaatttttagattcttggaggagatttcacgatgccctacataagaaccaaaatgatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagagag
gcctatgggatcaaagaaactatgcttgctaaactttatatcgaattgctcaatttacct
agaggaggaaaagatgctcttaaacttctaaattacagaacacctactggaactcgtgga
gatgctggagactttgcaatgattgcatattttgtgttgaaaccaagatgtttacagaaa
ggacaattaaccatacagcaagtaaatgacattttagactcaattgctagcaataatact
gccagaagaaaggacttagtaaagaagagttttcttcaccttataagtaagtgttcagca
cttgaacaaaagtggcttatacggatgattgtaaaggacttaaagcttggtgttagtcag
caaactgtattttccatttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcacgatccttcagtaggactcagtgatatttccatc
actttattctctccctttaagccaatgttagccgcaatagcagatattgagcgaattgag
aaggacatgaaaaaccagagtttctacattgaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggtgatatatatgaatacttctcacgaaatgggtataaatatacagat
cagtttggtacttcttctcaggagggttctcttacaccattcattcataatacattcaaa
acagatatacaaatgtgtatccttgacggtgagatgatggcctacaatcctaatacccaa
acttttatgcaaaagggaaataagtttgatattaaaagaatggtagaatattctgatctg
cagacttgttactgtgtttttgatgtattgatggtcaataataaaaagctaggacatgaa
accctgaaaaagaggtatgaaattcttagtagtatttttacaccaataccaggtagaata
gaaatagtgcagaaaacacaggctcatactaataaagaagtaattgatgctctgaatgaa
gcaatagataaaagagaagagggaattatgataaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttaaaaatcaagccagagtatgtaaatggattgatggat
gaactggacatcataattgttggtggctactggggtaaaggttcacgtggtggaatgatg
tctcattttttgtgtgctgtagcagagaagccctcttctggtgaaaaaccatcagtgttt
catactctttgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggtttg
aagttgtccaaacattggaaaccttttcataaaaaggctccaccaagtagcattttatgt
ggaacggagaaaccagaagtgtacattgaaccttgtaattctgtcattgttcagattaaa
gcaacagagattgttcccagtgatatgtataaaactgactgcactttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgaatgcatgactctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatctaagcactttcttgttggtggtgat
gatggaccacaagaaaaaaagcggaaagctgccccaaagattaagaaagttattggaatt
attgagcacttaaaagcacctaacctttctaacataaacaaagtttccaatatatttgaa
gatgtggaattttgtgttatgagtggaataagtagccatccaaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacctactgcgtt
attgcagggtctgagaacataagagtgaaaaacataatttcttcaaataaacatgatgtt
gtcaagcctgagtggctgctagaatgttttaagaccgaaagctgtgtgccatggcagcct
cattttatgattcatatgtgcccatcaacaaaacaacattttgcccgtgaatatgattgt
tatggtgatagttatttcactgatacagatttgaaccaactgaaggaagtattcacagga
attaaaagtcctagtgaacagactcctgaagaaatggcttctgtgattgctgatttagaa
tatcgctattcctgggactgctctcccctcagtatgtttcgacaccacactatttatttg
gacttgtatactgttattaatgacttgaatagcaaaattgagggaacaagattagctatt
acagccttagagcttcgatttcatggagcaaaagtagtttcttatttagctgagggagta
tctcatgtaatcattgggaaggatcatagtcgtgttgcagattttaaagcttttcgaaga
actcttaagagaaagtttaaaattctacaagaaggttgggtaactgattcaatagacaaa
tgtgagttacaggaggaaaatgaatatctggtttaa
DBGET
integrated database retrieval system
