Paracoccus sediminicola: PAF18_06220
Help
Entry
PAF18_06220 CDS
T09284
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdim03400
]
PAF18_06220
DNA repair and recombination proteins [BR:
pdim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PAF18_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
AAA_30
zinc_ribbon_2
AAA_22
DZR
SLFN-g3_helicase
Lipase_GDSL_2
DZR_2
Terminase_3
Motif
Other DBs
NCBI-ProteinID:
WBU58017
LinkDB
All DBs
Position
1256320..1257987
Genome browser
AA seq
555 aa
AA seq
DB search
MRLRPRQKVFVERSLAALSKHGNTLGVAPTGAGKTIMLSAVTGKLVEKTAAKACVLAHRD
ELTGQNRAKFGRVNPEVTTSVVDAGSKSWAGQVTFAMAPTLSRSPSLKAMPKLDLLVIDE
AHHAVADSYRRIIDRVRDANPEARIFGVTATPNRGDRKGLREVFDNVGDQVTLAELIASG
HLVPPRTFVIDVGVQEKLRAVRKTASDYDMGAVAEIMNRAPITEEVIRHWREKAGDRQTV
VFCSTVAHAENVAEAFNDNGIPAGVIHGDLGSETRRRILAAYASGETQVVVNVAVLTEGW
DHPPTPSVVLLRPSSCKSTMIQMVGRGLRTVDPAEHPGIVKTDCIVLDFGISSLTHGTLE
QDVDLDGRDPTPCDAPTKTCPECEATVPLAARQCPICGYEFLSDGEPPLESVVMSEIDLL
RRSSFAWEDLFDDESALMASGFNAWGGVFFLEGRWHAVGGGKNERTRLLGVGERTVCLAQ
ADDWLNEHETDESAFKSQRWLGQAPTEKQLQYLSPAQRQDYGLTRYRASALITFQFNRRD
IRRLVMSAAPERRAA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcgtccccgccagaaagtcttcgtggagcgcagcctcgctgcgctctcgaag
cacggcaacacgctcggcgtcgcgcccacgggcgcgggcaagaccatcatgctgtccgcg
gtcaccggcaagctggtggagaagacggcggccaaggcctgcgttctcgcccatcgcgac
gagctgaccggccagaaccgcgcgaagttcggccgggtcaatccggaagtaaccacctcc
gtggtggatgccggctcgaagtcgtgggctggccaggtcaccttcgccatggcgccgacg
ctgtctcgttcgccgagcctgaaggcgatgcccaagctcgatctgctggtgatcgacgag
gcgcatcacgcggtggccgacagctatcgtcggatcatcgaccgcgttcgcgacgccaat
cccgaagcccgcatcttcggcgtcacggcgacgcccaaccgcggcgaccggaaagggctg
cgcgaggttttcgacaatgtcggcgaccaggtcacgctggccgaactgatcgcgtctggt
cacctcgtcccaccgcgcaccttcgtgatcgatgtgggcgtgcaggagaagttgcgtgcc
gtgcgcaagaccgcgtccgactacgacatgggcgcggttgcggagatcatgaaccgcgca
ccgatcacggaggaggtcatccggcactggcgcgagaaggccggcgaccgccagaccgtg
gtcttctgctcgaccgtcgcccacgcggaaaacgtcgccgaagccttcaatgacaacggg
atccccgccggcgtcatccacggcgacctcggctccgagacgcgccgccggatcctcgca
gcctacgcctctggcgaaacgcaggtcgtcgtcaacgtggcggtgctgaccgaaggctgg
gatcacccgcccacccccagcgtggtgctgctgcggccgagctcctgcaagtcgaccatg
atccagatggtcgggcgcggcctccgcaccgtcgacccggccgagcaccccggcatcgtt
aagaccgactgcatcgtgctggatttcggcatctcgagcctgacgcacggcacgctggag
caggacgtcgatctcgacggccgcgatcccacaccgtgcgacgcgccgacgaagacctgc
ccggaatgcgaagcgacggtcccgctcgcagcccgccaatgcccgatctgcggatacgag
ttcctgagcgacggggagccgccgctcgaaagcgtggtcatgtccgagatcgacctcctg
aggcgctccagcttcgcctgggaggatctgttcgatgacgagtccgcgctcatggcgagc
gggttcaatgcctggggcggcgtgttcttcctcgaggggcgctggcacgccgtaggcggt
ggcaagaatgagcggacgcgcctcctcggcgtgggcgagcgcaccgtctgtctggcgcag
gccgacgactggctgaacgaacacgagaccgacgagagcgccttcaagtcccagcgctgg
ctgggccaggcgccgacggagaagcagctgcaatacctctcgcccgcgcagcggcaggat
tacgggctcacgcgctaccgcgcctcggcgctgatcaccttccagttcaaccggcgcgac
attcggcgtctcgtgatgtcggccgcgcccgagcggagggcggcgtga
DBGET
integrated database retrieval system
