Paracoccus sediminicola: PAF18_09925
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Entry
PAF18_09925 CDS
T09284
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00450
Selenocompound metabolism
pdim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PAF18_09925
Enzymes [BR:
pdim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PAF18_09925
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PAF18_09925
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WBU55820
LinkDB
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Position
complement(2001642..2002853)
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AA seq
403 aa
AA seq
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MSFDVAAVRADFPILAREVNDRPLVYLDNGASAQKPRQVIDAITRAYEGEYANVHRGLHY
LSNLATDRYEAVRGIIARFLHAKNEEEVIFTSGSTEAINLVAYGWAAPRLQAGDEIVLSV
LEHHANIVPWHFLRERQGVVLKWVEPEPDGSLPPEKILEAVGPKTRLIAVTHMSNVTGTV
VDVGAIAKRTEVPVLVDGSQAAVHMPVDVDALGVDFYCITGHKLYGPSGSGAIWIRAARQ
AEMRPFLGGGDMIRTVSRDSVDYADPPLRFEAGTPGIVNQIGLGAALDYMMQLGMENIAA
HERTLRDHARTRLRELNWLSIQGDAPDKGAIFSMTMDGAHAHDISTILDKRGIAVRAGSH
CAMPLMDFFGVSASARASFGMYNTLDEVDALIDGLQFCRELFA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatgtcgcggccgttcgcgccgatttcccgatcctcgcgcgtgaggtgaac
gaccggccgctggtctatctggacaacggtgcatcggcgcagaagccgagacaggtgatc
gacgccatcacccgcgcctatgagggcgaatacgccaatgtgcatcgcgggctgcactac
ctctccaacctggccaccgaccgctacgaggcggtgcgcggcatcattgcgcggttcctg
cacgcgaaaaacgaggaagaggtgatttttacctccggctcgaccgaggcgatcaatctg
gtcgcctatggttgggctgcgccgcgcttgcaggcaggcgacgaaatcgtgctttcggtg
ctggaacaccacgccaatatcgtgccgtggcatttcctgcgcgagcgtcagggcgtggtg
ctgaaatgggtcgagcccgagccggatggctcgctgccgccggaaaagattctggaagcg
gtcggacctaagaccaggctgatcgccgtgacccatatgtcgaatgtgaccggaaccgtg
gtcgatgtcggtgccatcgcgaagcgcaccgaggtgccggttctggtcgatggcagccag
gccgcggtgcatatgccagtcgatgtcgacgcgctcggcgtcgatttctactgcatcacc
ggtcacaagctttatggcccctcggggtcgggcgccatctggatccgcgccgcgcgtcag
gctgaaatgcggcctttcctcggcggtggcgatatgatccgcaccgtgtcgcgcgacagc
gtcgattatgcggatccgcctctgcgcttcgaggcggggacgccggggatcgtgaaccag
atcgggctcggcgccgctctggattacatgatgcaactcgggatggagaacatcgccgcc
catgagcggaccttgcgcgatcatgcccggacccgcctgcgtgagctaaactggctgagc
atccaaggtgacgcgcccgacaagggggcgatcttttccatgacgatggacggggcgcat
gcgcatgatatctccaccatcctcgacaagcgcggcatcgcggtgcgcgcaggcagtcac
tgcgccatgccgctgatggatttcttcggcgtttcggccagcgcccgggcgagcttcggc
atgtataacacgctggacgaggtcgacgcgctgatcgacggcctgcaattctgccgcgag
ctttttgcatga
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