KEGG   Paracoccus sediminicola: PAF18_16725
Entry
PAF18_16725       CDS       T09284                                 
Name
(GenBank) type IV secretion system protein B4
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
pdim  Paracoccus sediminicola
Pathway
pdim03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PAF18_16725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdim02044]
    PAF18_16725
Enzymes [BR:pdim01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PAF18_16725
Secretion system [BR:pdim02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PAF18_16725
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_10 ATPase TrwB_AAD_bind AAA_16 DUF87 AAA_25 FtsK_SpoIIIE nSTAND3 CbiA Zot SbcC_Walker_B SIP1 AAA_29
Other DBs
NCBI-ProteinID: WBU58611
LinkDB
Position
p2:complement(63615..65978)
AA seq 787 aa
MPRDAALDPRTMTPEWYSRETRLAHMLPYVSLVDDQTVRTRVNELFQCIRLDGVNSYTTD
DAYLDKVTALFARIIAQLGPEFSYYVHKVSKAITLDLEPLREDSFAGEVDRLWREKLETS
GLRDKTLTLTVIHRPPPKSVLPFLNRSAPDRLKEATEKRLRRLAEAVNVFLSGLTELNPR
VLSAKSGELIGFLGALNTGQELPLYPANTYGFLSCNVANTRVTFQGDHFELSEGVVGHRY
GKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQDAAL
SLMEALDIAADDLEAKRQSFGEHHMVVTIFCDTIDELQTLSAEIVNAAAAEGVKMIGERV
AAKAHYLSQHPGNQPKRVRASAITNRNFADFAAFHRTQLGKPASKVPWGKVITLFPTPEQ
SAYRFSYHEQGSPDKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRPGARIFVFDYRLGME
MAVRANGGRYASLNAGQPTGLNPLWTETDARGTAWLSDWLTTLLYRADKPLTPAQTNRIQ
EVVRQNAQATNPALRNWRDFASLFVSTDDGGDLHQRLLEWTEDGRYGWIFGQSLEDTFSL
KGDLVGFDLTGILDSEADKERMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAE
RLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIVEAVPTQILLPNIRAQPADYAMLNL
TEKELDVLLNTGSNSRLALIRDDQGSIVVDADLSALGPTLTILGGMEKGEALVGADYRNR
PDFWRLS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccccgtgatgctgcgctcgatccccgcacgatgacaccagagtggtattcacgcgag
acccgcctcgcgcacatgctgccctatgtgagcttagttgatgaccagaccgtgcggacg
cgggtcaacgagcttttccagtgcatccggctcgacggggtcaatagctacacgaccgat
gacgcatatctcgacaaggtgaccgcgctctttgctcggatcattgcgcaattggggccg
gagttcagctattacgtccataaggtctcgaaggcgatcacgctggacctcgagccgctg
cgcgaggacagtttcgcgggagaagtcgaccgtctctggcgcgagaaactcgagaccagc
gggttgcgcgacaagaccctgaccctcacggtgatccatcgcccgcctccgaaaagcgtc
ctgccgttcctgaaccgcagcgcgccggatcgcctcaaggaagcgaccgaaaagcgcctt
cgccgattagccgaggccgtgaacgtgttcctgtctggcctgacggagctgaacccacgt
gtgctttcggccaagtccggcgagttgatcggctttctgggggccctcaacactggccag
gaactgccgctctatccggcgaacacctatggcttcctgtcctgcaacgtcgccaacacg
cgagtgacgtttcaaggcgatcacttcgagctctccgaaggcgtcgtgggacaccgctac
ggcaagagtttcaccatcggggaatactcggaaggcacctcctgcaccatgttcgacatg
ctgaacctgccggtcgacatgatcgtcacccattccttcacgccgatcaattcgaacctc
atggcgggccgcatcaagcggcaaaagcgtcagatgcaggccagccaagatgcggcgctc
tcgctgatggaagcactcgacatcgccgcagatgatctcgaggccaagcgccagagcttt
ggcgagcaccacatggtcgtgacgatcttctgcgatacgatcgatgagctgcagacgctc
agcgccgaaattgtcaacgccgccgccgccgaaggcgtgaagatgatcggcgagcgcgtc
gcggctaaagcgcattacctcagccagcatcctggcaaccagcccaagcgcgtgcgcgcc
agtgccatcaccaatcgcaacttcgcggatttcgcggccttccaccggacccaactcggc
aaaccggccagcaaagtgccctggggcaaggtcatcaccctgtttccgacgccggagcag
agcgcctaccggttttcctatcacgaacaaggctcgcccgacaaagaaccgaccagcgga
cataccctgatcatggggcggcccgggtcgggcaaatcggtgctgtccgccttcctgatg
acccaagcccgtcgcccaggggcgcggatcttcgtcttcgattaccgtcttggcatggag
atggccgtccgtgccaatggcgggcgctacgcctccctgaacgcaggccagcccacgggt
ctcaacccgctctggaccgagacggatgcgcgcggcaccgcctggctctcggattggctc
acaaccctgctctaccgcgccgacaagccgctgaccccggcgcagaccaaccgcatccag
gaagtcgtgcgccagaacgcgcaggccacaaacccggccctgcggaactggcgggatttc
gcatcgctttttgtgtccaccgacgatggcggcgatctgcaccagcgcctgctcgagtgg
accgaagacggccgctatggctggatcttcgggcagagccttgaggacactttttcactc
aaaggcgatctcgtgggcttcgatctgaccggcattctcgacagcgaggccgacaaggaa
cggatggcggtcctgtcctatcttttccgccgggtcgagcgcgagatcgaggaccgccgc
cccaccatcatcgtgatcgacgaggcctggaaggcgctcgacaacgcatatttcgccgag
cggctgtcgaactggctggtgaccgcgcgcaagcagaacacggttgccgtgatgatgacg
caatacgcaagccagcttgagcgcacccggaccggcaagaccatcgtcgaagccgttccg
acgcagatcctgctgcccaatatccgcgcgcagcctgcggactacgccatgctgaacctc
acggagaaggagctcgacgtccttctcaacacgggcagcaacagccgcctcgcactgatc
cgcgacgatcagggctcgatcgtcgtcgatgccgatctgagcgcccttggccccacactc
accatccttggcggcatggaaaagggcgaagcgcttgtcggcgccgattaccgcaaccgc
ccagatttttggaggctttcatga

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