Paraburkholderia dioscoreae: PDMSB3_1223.1
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Entry
PDMSB3_1223.1 CDS
T08115
Name
(GenBank) Carbohydrate-selective porin
KO
K07267
porin
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_1223.1
Transporters [BR:
pdio02000
]
Other transporters
Pores ion channels [TC:
1
]
PDMSB3_1223.1
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
VVD32514
UniProt:
A0A5Q4Z369
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All DBs
Position
II:complement(1260733..1262265)
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AA seq
510 aa
AA seq
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MKFAHFNGPRVKARPFRDSVPRASAARRSRLACLPSMRRAALCTAFAWASLTAGAAMAEA
NPDATPEAPEADLKIQATQTNQWTGFWNRQQMLGDIGGLRPWLGKYGVTFTLTETSEVLA
NLRGGLAHGADYDGLTTGTVQLDTQKAFGLPGGLFNVSALQIHGANLSANKLGTLNTASG
IEADDATRLWELWYQQSFLNRRIDVKIGQQSIDQEFITSTYSALFVNTMFGWPALPSYDM
PSGGPAYPLSDLGVRVRGQITPSLTALAGVFDGDPLGNNPDNKSGTNFNLHNGTLFIGEL
QYAINQPADGEMVGAGGGGLPGTYKLGVWYNNGSFADQRYDNTGLSLASPATSGVAQNHH
GDYSIYAVADQMIWRPDPDEARSIGVFARVMGAPGDRNLVSLAANLGVVMKAPFAGRDND
SVGLALTYIKVGNHVNGLDLDSRAFSNGPYGVRTSETTLEATYQYQVNPWWQLQADAQYT
FNAGAGQNPNDPTQPLRNTFVIGLRTNINF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcccatttcaacggaccccgcgtgaaagcgcgtccgtttcgcgattccgtg
ccacgcgccagtgcggcgcgccgttcgcgcctcgcctgtttgccctccatgcggcgcgcc
gcgctttgcacggcgttcgcgtgggcttcgctgacagccggcgcggccatggccgaagcc
aatcccgacgccacgccggaagcgcccgaggccgacctgaagattcaggcgacccagacg
aaccagtggaccggcttctggaatcgacagcagatgctcggcgacatcggcggcctgcgc
ccctggctcggcaaatacggcgtgaccttcacgctcaccgaaaccagcgaagtgctcgcc
aacctgcgcggcggtctcgcgcacggcgccgactacgacggcctgacgaccggcaccgtg
caactggacacgcaaaaggcattcggcctgccgggcggcctgttcaatgtcagcgcgttg
cagattcacggcgccaatctcagcgccaacaagctcggcacgctgaacacggcgagcggc
atcgaagcggacgacgccactcgcctgtgggaattgtggtatcagcagtcgttcctgaac
aggcgcatcgacgtgaagatcggtcagcaaagtatcgaccaggaattcatcaccagcacg
tattcggcgctgttcgtcaacacgatgttcggctggcctgccctgccctcgtatgacatg
ccgtccggcggcccggcgtatccgctgtccgacctcggcgtgcgcgtgcgcggccagatc
acgccttcattgaccgcgctggccggcgtattcgacggcgatccgctcggcaacaacccc
gacaacaagagcggcaccaacttcaacctgcacaacggcacgctgttcatcggcgaattg
cagtatgcgatcaaccagccggccgacggcgaaatggtcggcgcgggcggcggcggtttg
cccggcacctacaagctcggtgtctggtacaacaacggcagcttcgcggaccaacgctac
gacaacaccggcctgtcgctcgccagtccggccaccagcggcgtcgcccagaatcatcac
ggcgactacagcatctacgcggtggccgaccagatgatctggcgtccggacccggacgag
gcgcgcagcatcggcgtattcgcgcgcgtgatgggcgcgcccggcgaccgcaacctggtg
agcctcgccgccaacctcggcgtggtgatgaaagcgccgttcgccggccgcgacaacgac
agcgtgggcctcgcgctcacctacatcaaggtcggcaaccacgtgaacggcctcgatctg
gacagccgcgcattcagcaacggtccttatggcgtgcgcaccagtgaaaccacgctcgag
gcgacctaccagtatcaggtcaatccgtggtggcaactgcaagccgatgcgcaatacacc
ttcaacgccggcgccggccagaatccgaacgatccgacgcaaccgctgcgcaacacgttc
gtcatcggcctgcggaccaacatcaatttctga
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