KEGG   Pantoea soli: D8B20_11465
Entry
D8B20_11465       CDS       T06714                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
pdis  Pantoea soli
Brite
KEGG Orthology (KO) [BR:pdis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdis03400]
    D8B20_11465
DNA repair and recombination proteins [BR:pdis03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     D8B20_11465
SSDB
Motif
Pfam: ResIII DEAD Helicase_C SWI2_SNF2 AAA_30 zf-tcix zinc_ribbon_2 AAA_22 SLFN-g3_helicase DZR AAA_16 UPF0547 DUF6194
Other DBs
NCBI-ProteinID: QDY42475
UniProt: A0A518XE72
LinkDB
Position
2464295..2466049
AA seq 584 aa
MSFTLRPYQQEAVDATVAHFRRHATPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHSKYQAYGLEADIFAAGLQRKQSTGKVVFGSVQSVARNLDRFDSAFSLVIVDECH
RISDNDESQYQQLFAHLRQHNPQLRLLGLTATPFRLGKGWIYQYHYHGMVRGDDRALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLVPQNNGLFSEADLNRELKQQNRVTPH
IIRQIVEFAQDRRGVMVFAATVEHAREILSLLPDTSALVSAETPVKERDRLIQQFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEEGQVIEHFGRRCQGVLEDDEGQ
RAQCDYRFRFKSCPDCGAENDIAARRCHQCDRVLVDPDDMLKAALKLKDARVLRCSGMTL
AHGRDDKGEWLKASYFDEDGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVELGWQTAA
DVVALHPLLRHPDFVVARAKGHFWQVREKMFDYQGRYRRANELR
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgtcttttactctgcgcccgtatcaacaggaggcggtggatgccaccgttgcccatttt
cgtcgccacgccacgcctgcggtgatcgtgctgcctaccggtgccggcaaaagcctggtg
attgctgaactggcgcgcctggcacgcggccgcgtcctggtgctggcgcatgtcaaagag
ctggtggagcagaaccacagcaaatatcaggcgtatggtctggaggccgatatctttgcg
gccggtctgcagcgcaaacagagcaccggcaaggtggtgtttggcagcgtgcagtcggta
gcgcgtaatctggatcgctttgacagcgccttttcgctggtgattgtggatgagtgccac
cgcatcagtgataacgatgaaagccagtatcagcagctgttcgcccatctgcgccagcac
aatccgcagttacgcctgctgggattaaccgccacgcccttccggctgggtaaaggctgg
atttatcagtatcactatcacggcatggtgcgcggcgatgatcgggcgctgttccgcgac
tgtatctatgagctgccgctgcgctacatgattaaacacggctttctggtgccgcctgaa
cggctcgatatgccggtggtgcagtatgatttcagtcgcctggtgccgcaaaacaacggg
ctgttcagcgaggccgatctgaaccgcgagctgaaacagcaaaaccgcgttaccccgcat
attatccggcagattgtggagttcgcgcaggatcgccgcggcgtaatggtgtttgccgcc
acggtggagcacgcgcgggagatcctcagcctgctgccggacaccagcgcgctggtgtcc
gcggaaacgccggtaaaggagcgcgatcgtctgattcagcagtttaaagcgcagcagctt
aagtttctggtgaacgtagcggtgctgaccaccggttttgatgctccgcatgtggatttg
attgccattctgcgcccgaccgaatcggtcagcctgtaccagcagattgtcggacgcggc
ctgcgtctggcaccgggtaaaaccgactgcctgatcctcgattacgccggcaatcctcac
gatctcttcacgccggaagtgggcgcgcccaaaggggccagcgataaccagccggtgcag
gtgttttgccccgcctgcggctttgccaacaccttctggggcaaagccactgaagagggt
caggtgattgagcattttggtcgtcgctgtcagggcgtcctggaagatgatgaaggccag
cgcgcgcagtgcgattatcgcttccgctttaaaagctgcccggactgcggggcagagaac
gatatcgccgcccgccgctgccaccagtgtgaccgcgtgctggtggatccggatgacatg
ctgaaagcggcgctgaagctaaaagatgcgcgcgtgctgcgctgcagcggtatgacgctg
gcgcacggccgcgatgataagggggaatggctgaaagccagctatttcgacgaagatggc
accagcgtcagcgagcgcttccggctgcaaacgccggcgcagcgtaaagcgtttgaacag
ctgtttatgcgtccgcaccagcgggcaccaggcgtggagctgggctggcaaaccgccgcc
gatgtggtcgccctgcaccccctgctgcgccaccccgattttgtcgtggcgcgtgccaaa
ggccacttctggcaggtgcgggaaaaaatgttcgattatcagggacgttatcgccgtgcg
aacgagttgcgctaa

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