Pantoea soli: D8B20_11465
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Entry
D8B20_11465 CDS
T06714
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pdis
Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_11465
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D8B20_11465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
zinc_ribbon_2
AAA_22
SLFN-g3_helicase
DZR
AAA_16
UPF0547
DUF6194
Motif
Other DBs
NCBI-ProteinID:
QDY42475
UniProt:
A0A518XE72
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All DBs
Position
2464295..2466049
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATVAHFRRHATPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHSKYQAYGLEADIFAAGLQRKQSTGKVVFGSVQSVARNLDRFDSAFSLVIVDECH
RISDNDESQYQQLFAHLRQHNPQLRLLGLTATPFRLGKGWIYQYHYHGMVRGDDRALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLVPQNNGLFSEADLNRELKQQNRVTPH
IIRQIVEFAQDRRGVMVFAATVEHAREILSLLPDTSALVSAETPVKERDRLIQQFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEEGQVIEHFGRRCQGVLEDDEGQ
RAQCDYRFRFKSCPDCGAENDIAARRCHQCDRVLVDPDDMLKAALKLKDARVLRCSGMTL
AHGRDDKGEWLKASYFDEDGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVELGWQTAA
DVVALHPLLRHPDFVVARAKGHFWQVREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttactctgcgcccgtatcaacaggaggcggtggatgccaccgttgcccatttt
cgtcgccacgccacgcctgcggtgatcgtgctgcctaccggtgccggcaaaagcctggtg
attgctgaactggcgcgcctggcacgcggccgcgtcctggtgctggcgcatgtcaaagag
ctggtggagcagaaccacagcaaatatcaggcgtatggtctggaggccgatatctttgcg
gccggtctgcagcgcaaacagagcaccggcaaggtggtgtttggcagcgtgcagtcggta
gcgcgtaatctggatcgctttgacagcgccttttcgctggtgattgtggatgagtgccac
cgcatcagtgataacgatgaaagccagtatcagcagctgttcgcccatctgcgccagcac
aatccgcagttacgcctgctgggattaaccgccacgcccttccggctgggtaaaggctgg
atttatcagtatcactatcacggcatggtgcgcggcgatgatcgggcgctgttccgcgac
tgtatctatgagctgccgctgcgctacatgattaaacacggctttctggtgccgcctgaa
cggctcgatatgccggtggtgcagtatgatttcagtcgcctggtgccgcaaaacaacggg
ctgttcagcgaggccgatctgaaccgcgagctgaaacagcaaaaccgcgttaccccgcat
attatccggcagattgtggagttcgcgcaggatcgccgcggcgtaatggtgtttgccgcc
acggtggagcacgcgcgggagatcctcagcctgctgccggacaccagcgcgctggtgtcc
gcggaaacgccggtaaaggagcgcgatcgtctgattcagcagtttaaagcgcagcagctt
aagtttctggtgaacgtagcggtgctgaccaccggttttgatgctccgcatgtggatttg
attgccattctgcgcccgaccgaatcggtcagcctgtaccagcagattgtcggacgcggc
ctgcgtctggcaccgggtaaaaccgactgcctgatcctcgattacgccggcaatcctcac
gatctcttcacgccggaagtgggcgcgcccaaaggggccagcgataaccagccggtgcag
gtgttttgccccgcctgcggctttgccaacaccttctggggcaaagccactgaagagggt
caggtgattgagcattttggtcgtcgctgtcagggcgtcctggaagatgatgaaggccag
cgcgcgcagtgcgattatcgcttccgctttaaaagctgcccggactgcggggcagagaac
gatatcgccgcccgccgctgccaccagtgtgaccgcgtgctggtggatccggatgacatg
ctgaaagcggcgctgaagctaaaagatgcgcgcgtgctgcgctgcagcggtatgacgctg
gcgcacggccgcgatgataagggggaatggctgaaagccagctatttcgacgaagatggc
accagcgtcagcgagcgcttccggctgcaaacgccggcgcagcgtaaagcgtttgaacag
ctgtttatgcgtccgcaccagcgggcaccaggcgtggagctgggctggcaaaccgccgcc
gatgtggtcgccctgcaccccctgctgcgccaccccgattttgtcgtggcgcgtgccaaa
ggccacttctggcaggtgcgggaaaaaatgttcgattatcagggacgttatcgccgtgcg
aacgagttgcgctaa
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