Pantoea soli: D8B20_20105
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Entry
D8B20_20105 CDS
T06714
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pdis
Pantoea soli
Pathway
pdis01501
beta-Lactam resistance
pdis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D8B20_20105
01503 Cationic antimicrobial peptide (CAMP) resistance
D8B20_20105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_20105
01504 Antimicrobial resistance genes [BR:
pdis01504
]
D8B20_20105
Transporters [BR:
pdis02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D8B20_20105
Antimicrobial resistance genes [BR:
pdis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D8B20_20105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QDY44240
UniProt:
A0A518XJ73
LinkDB
All DBs
Position
unnamed2:complement(7539..10673)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSKFFIERPIFAWVLAILIMVAGVMSISGLSINQYPNIAPPAISVSVTYPGASAETVQET
VVQVIEQQLTGIDNLRYLESNSNSDGSATIIATFNQGTDPDIAQVQVQNKVSVAETSLPT
EVTEQGVTVAKYQANFMMVLGLVSKDGKLSDADLGDILVSKMQDPIARTKGVGDFMVMGA
EYAMRIWLDPSKLVKYGLIPSDVSTAIKNQNTQVSSGKIGGLPTAPGTELSASIVGKTRF
TSAEQFRNVLLKVNRDGSQVRLKDVASVDLGPEDYSISSTYNGRPSTGMALRLATGSNIL
ETVNAVRATVDRLKTTLPDNVEIVYPYDTSPVVSASIHEVVKTLIEAIILVFFVMLIFLQ
NFRATVITTMVVPVVLLGTFGVLYACGYTINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEEGLSPKEATIKSMQQVQSALFGIAMVLSAVLLPMAFFSGSTGIIYRQFSITIVSAMAL
SVLIALIFTPALCATFLKPVQHDKKKNGFAGWFNRNLDRGTTHYTRSVRHVIHRRGIFMI
VYLGIVAGTCFLFTRLPTTFLPDEDQAVMMVQTTLPQNASAERTQKVISEINDYFLKDEK
ASVDSVFSANGFSFAGRGQNSSVSFVKLKTWSERPDANQKVQALASRTMAHFARNPDAKV
IAMVPPAVMELGNSTGFDMYLEDENNQGHDALMAAMNKFLELASKDKRLSMVRHNGMADE
AEYHLSIDEEKANALGVSSSDIDDTLSAAWGSSYVNQFLFNGRVKNVYIQGKASSRVTPD
DMEKWYVKNDEGKMVPFSAFGRGEWQYGSPRYERFNGVSAVNIQGSPADGYSSGDAVSAV
EEIAKQMPEGYKVEWHGLSYEEQMSGSQTTTLYLLSVLIVFLCLAALYESWSIPLSVMLV
VPLGVLGTVSAVLMRDLQNDVFFQVGLLTTVGLAAKNAILIVEFAKELHERDGKDLVEAA
IEAAKLRIRPIIMTSMAFILGVLPLTISSGAGAGSQHSIGTAVIGGMISATFLAIFFVPM
FYVLVMKISQRLFKKSSQEEASAQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtttttcattgagcgccctatctttgcctgggtgctggccatactgattatg
gttgccggcgtcatgtctatttcaggcctgtccatcaaccagtacccgaatattgcacct
ccggcgatttccgtttcagtaacctatcctggcgccagcgccgaaacggtgcaggaaacg
gttgttcaggtgattgagcaacagctgacgggtatcgataatcttcgctatctggaatca
aacagtaacagtgacggcagtgccaccatcattgccacctttaaccagggaacagacccg
gacattgcacaggttcaggtgcaaaacaaagtctctgtcgcagaaacatctctgccgact
gaagtgactgaacagggcgtcacggtcgccaagtatcaggcaaactttatgatggtactg
gggctggtttcaaaggatggtaaattatccgatgcggatctgggtgatattttagtttca
aaaatgcaggatcctattgcccgaaccaaaggcgtgggcgacttcatggtcatgggagcg
gaatacgccatgcgtatatggctcgatccgtctaagctggttaaatatggcctgatccca
agcgacgtaagcactgctattaaaaaccagaacacccaggtttcatcaggcaagattggt
ggtctgccaaccgctccagggactgaactgagcgcatcaattgtgggtaaaacccgcttt
acttctgccgagcagttcagaaatgtccttctgaaggtaaaccgcgacggctcacaggtg
cgcctgaaagacgtcgcctcagttgacctgggaccagaagattacagcatctcctctacc
tacaacgggcggccttcaacgggcatggcgctgcgtctcgcaacgggctccaatattctt
gaaacggtaaatgcggtccgcgcaaccgtagacaggctgaaaaccacgctgcctgataac
gttgaaatcgtttacccttacgacacgtcacctgtggtcagcgcctccattcatgaagtt
gttaaaacgctgattgaggcgattatcctcgtcttctttgtcatgctgatattccttcag
aatttccgcgcaaccgtcattaccacgatggtcgtaccggtcgtgctgctgggaactttc
ggtgtgctttatgcctgcggttacaccatcaataccctgaccatgtttggtatggttctc
gccataggattgctggttgatgacgcaattgtggtggtggaaaacgtagagagggtaatg
gaagaagaaggcctctcaccgaaagaggccaccatcaaatccatgcagcaggtacagagt
gcgctgtttggtatcgccatggtgctgtctgcggtgttactgcctatggccttcttcagc
ggctccacaggcattatctatcgtcagttctccattaccattgtttcggccatggccctg
tcagtgctgattgcactgattttcacccctgccctgtgcgccacgtttcttaagcccgtc
cagcacgacaaaaagaaaaatggttttgccggctggttcaaccgtaatcttgatcgcgga
acaacgcattacacccgcagcgtcaggcacgttattcaccgccgcggcatcttcatgatt
gtttatctcggcattgtggcaggaacctgcttcctctttaccaggctgcccaccactttc
ttgccggatgaagaccaggccgtaatgatggttcagacaacgctgcctcaaaatgcgagc
gcagagcgaacccagaaagtcatttccgagatcaatgattatttccttaaggatgagaag
gcttctgtagactcagttttctccgcaaacggattcagttttgccggccggggccagaac
agttcggtgtcgtttgtgaagctgaaaacctggtctgagcgcccggacgcgaatcagaag
gttcaggctctcgccagccgtacgatggcgcattttgcccgtaatccggatgcaaaagtg
atagccatggtcccacctgccgtgatggaactcggcaacagcaccgggtttgacatgtac
cttgaggatgaaaacaaccagggacatgacgcgctgatggccgctatgaataaattcctt
gaactcgcctctaaagacaagcggctttcaatggtcaggcataacggcatggctgatgaa
gccgagtatcacctgagtatcgatgaggaaaaagctaacgcgcttggcgtaagcagctct
gacattgatgacacgctctcagcggcgtggggatcaagctacgtaaaccagtttctcttt
aacggtcgtgtcaagaacgtctacatccagggcaaggcttcctcacgcgttacgcctgat
gatatggagaagtggtacgtcaaaaacgatgagggcaagatggtcccgttctctgcattt
ggccgtggagagtggcagtatggctcgcctcgttatgagcgctttaatggcgtttcggcg
gttaacatacagggctcacctgctgatggctacagcagcggtgatgcggtcagtgcggtt
gaagaaatcgcgaaacagatgcccgaaggttacaaagttgaatggcacggactgtcgtac
gaagagcaaatgtcaggatctcagacaacaaccctttacctgctgtcagtgctgatcgtt
ttcctctgcctcgccgcgctgtatgaaagctggtctatccctctgtctgtcatgctcgtg
gttccgctgggtgttctgggaacggtcagcgccgtactgatgcgggatctgcagaatgac
gtatttttccaggtgggtctgctgacgactgtcgggcttgcggcaaaaaatgccatcctt
attgtcgaatttgccaaagagcttcatgagcgtgacgggaaggatctggttgaggctgcc
attgaggctgcaaaactgcgtattcgccccatcattatgacctctatggcctttattctg
ggcgtcctcccgctcactatctcgagtggcgcaggtgcgggcagtcagcactctattggt
acggcggttatcgggggcatgatctcggccaccttcctggccatcttcttcgttccgatg
ttctacgtcctggtaatgaaaatatctcagcgtctgtttaaaaaatcatctcaggaagag
gcttcagcccaatga
DBGET
integrated database retrieval system
