Pseudoalteromonas donghaensis: D0907_12125
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Entry
D0907_12125 CDS
T05890
Name
(GenBank) anti-sigma E factor
KO
K03598
sigma-E factor negative regulatory protein RseB
Organism
pdj
Pseudoalteromonas donghaensis
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdj03021
]
D0907_12125
Transcription machinery [BR:
pdj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D0907_12125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MucB_RseB
MucB_RseB_C
LolA_like
Motif
Other DBs
NCBI-ProteinID:
AXV65965
LinkDB
All DBs
Position
complement(2695670..2696626)
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AA seq
318 aa
AA seq
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MKVFTFILSLVLIAPAFASDENPAKALLLDMAEAVHTRNFDASFVVVKGQAMEPYRWLHA
KQGNVELEHLSLLNGAGLEMARVNDQVTYFEPHSEPYSVQTDSIAGPIPEVLFKDIERLS
AQYDFVLGGKGRIAGRSAQLVRIESKDEYKFNYWIWLDLESSLLLKSAYVNHKGEMLEQL
QLTHISVTEQPAQMLLEMQNRDFPPPLPVSEIDNESTGSAVNNWKIGWLPAGFKLLKSDR
HKLDLNNELTDYYLYSDGFVEVSVFVQRPLPGKRPSGALSSGATTVYVHNGGSFDVSVVG
NIPAMTAKAIAESVARPL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtttacttttattttgtcgctggtgttaatagctcccgcttttgccagcgac
gaaaaccccgccaaagcattattactcgatatggctgaagccgttcatacccgcaatttc
gacgcatcgtttgtcgtcgttaaaggccaagcaatggaaccttatcgctggctgcatgcc
aagcaaggtaatgtagagcttgaacatttaagtttactaaatggcgcagggcttgaaatg
gctcgcgtaaacgatcaagtgacttattttgagccccattcagagccatattctgtgcaa
actgattcaattgcagggcctattcctgaagtactttttaaagatatagagcgtttaagt
gcgcagtacgattttgtactaggcggaaaaggtcgtatagcagggcgctcagcgcagctt
gtgcgtattgagtcaaaagatgagtacaaattcaattattggatatggttagatttagaa
tcatcactgttattgaaatcagcgtatgtgaaccacaaaggtgaaatgcttgagcaatta
cagttgacccacattagtgtgacagagcaacctgcacagatgctgttagaaatgcaaaat
cgtgattttcctcctccgcttccggtcagtgaaattgataacgaaagcacaggcagtgcg
gttaataattggaaaattggctggttgccagcaggctttaaattattaaagtcagaccgt
cacaagttagatttaaataacgaactaaccgattactacttgtactctgatggttttgtt
gaggtttctgtgttcgtacaaagaccactgcctggtaaacgacccagtggggcgctgtca
tcgggtgcgacaaccgtgtatgttcacaatggtggtagctttgacgtgtcggttgttggt
aatatccccgctatgacagccaaagccattgcagagtcggtagcgcgacctctttaa
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