Pseudoalteromonas donghaensis: D0907_17825
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Entry
D0907_17825 CDS
T05890
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pdj
Pseudoalteromonas donghaensis
Pathway
pdj01501
beta-Lactam resistance
pdj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0907_17825
01503 Cationic antimicrobial peptide (CAMP) resistance
D0907_17825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdj02000
]
D0907_17825
01504 Antimicrobial resistance genes [BR:
pdj01504
]
D0907_17825
Transporters [BR:
pdj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0907_17825
Antimicrobial resistance genes [BR:
pdj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0907_17825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AXV67180
UniProt:
A0AAD0WE69
LinkDB
All DBs
Position
unnamed1:339575..342706
Genome browser
AA seq
1043 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIVVMLAGILAIKSLPVAQYPSIAPPAISIQANYPGASARTLEDT
VTQVIEQKMKGLDGLLYMSSTSESNGSATLTLTFSADTDPDIAQVQVQNKLSLATPLLPE
EVQRQGVSVAKSARNFLMVVGFVSEDGSMNNIDIGDYVSSNVLDIISRVNGVGEVQLFGS
QYAMRIWLDPSKLQKYALTPADISAAISAQNAQVSAGQLGALPAVDGQQLNATVTAQSRL
QTPEQFRDIFVKTNPDGSVVRLSDVAKVELGGENYGVVARFNGKPASGLGVKLASGANAL
DTADGVKAALAELEPFFPEGLTTVVPYDTTPFVSLSIEKVVSTLIEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILQVFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
TEENLSPLEATRKSMDEIKGALVGIAMVLSAVFVPMAFFAGSTGVIYRQFSITLVTAMSL
SVLVALILTPALCATMLKPSHVHNDKSLFGRFFLGFNRGFDKTNAGAQGFVARMIKHSKR
YLLCYGLIVGGMVYIFSQLPSAFLPDEDQGILFNQVSLPAGSTTEQTLKVVEKMEHHFLE
DQSEAVKSIFTVTGFSFAGSGQNAAIGFVGLKHWDERQRPDLSVGAVAGKAMGYFSTIKE
AFVFAFPPPAVVELGTANGFTLFLQDRVGLGHDKLLEARNMFLGMAAKNPVLSGVRPNGQ
EDKPELELDIDLAKAEALGLTQTDINNTLSTAWGSRYVNDFIDRGRVKKVYLQGTPESRM
VPEDLDKWYVRNANGDMVPFTAFAHSYWTYGSPRLERYNGFSAMEIQGAAAPGYSTGQAM
VEVEKIVKQLPPGVAFEWTGISYEERLSGGQAPLLYALSLLVVFLCLAALYESWSVPAAV
MLIVPLGVFGAGVASFVFNLSNDIYLQVGLLTTIGLASKNAILIVEFAIHKMDEGMKLVD
AAIAAIRLRLRPIFMTSMAFVCGVLPLAIASSAGSGAQNALGIAVIGGTLASSTIVVLFV
PLFFVLVRRVFPGKQKVNSEEQA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgattttttattgatcggcctatttttgcatgggtacttgccatcgttgtgatg
ctggcaggtattcttgcaataaaaagtttgccggttgcgcagtatccatcaatagcgcca
cctgccattagcattcaagccaattacccaggtgcgtctgcccgtacattagaagatacg
gttacccaggttatagaacaaaagatgaaagggcttgatggcttgttgtatatgtcatca
acatcggagtctaatggttcagcaacacttacattgacttttagcgctgatacagaccct
gatatcgcccaagtacaagtacaaaacaaactgtcacttgcaacgccactgttacctgaa
gaagttcagcgccaaggtgtgtctgttgcgaaatcggcacgtaacttcttaatggttgtc
ggttttgtttctgaagacggcagtatgaataatatcgacattggtgattatgtttcatca
aatgtgctcgacattatctcgcgtgttaatggcgtgggtgaggttcagttatttggttct
caatatgcaatgcgcatttggcttgacccatcaaaactacaaaaatatgcattaacaccg
gcagatatcagtgcagccattagtgctcaaaacgcacaagtatctgcgggtcagcttggg
gcattacctgcagttgatggccagcaattaaatgcgaccgtaacggcacaaagccgcctt
caaacgccagagcaatttagagatatattcgttaaaacgaatcctgatggttcagttgtg
cgcctaagcgatgtagcaaaggttgaattaggcggtgaaaactatggtgtggttgcgcgt
tttaacggtaaaccagcatcgggtttaggggtaaagctagccagtggtgcaaacgcactt
gatactgctgatggtgttaaagcggcacttgctgagcttgaacctttctttcctgagggg
ttaacgacagttgtaccgtatgacacaacgccttttgtctctttatcaatcgaaaaagtg
gttagtacgctaattgaagccgtggtgttggtgttcttagttatgtatttattcttacag
aactttagagcgacacttattccaacaatcgctgtaccggttgtattactgggtaccttt
gcgattttacaagtatttggttattcaattaataccttaaccatgttcgctatggtgtta
gcgataggcttacttgttgatgatgctatcgttgtcgttgaaaacgtggaacgtgtaatg
acagaagaaaacctgtcaccgcttgaagcaacacgtaaatcaatggatgaaattaaaggg
gccttggtggggattgccatggtgctttctgcggtattcgttcctatggctttctttgca
ggatcgacgggcgttatttatcgtcaattctcaattacgcttgtaacagcaatgagcttg
tcggtattagtggcacttattcttacaccagcactgtgtgcaacaatgctaaagccaagc
catgtacacaatgataaatcactatttggtcgtttctttttaggcttcaaccgaggtttc
gataaaaccaatgcgggtgcgcaagggtttgttgcacgcatgattaagcacagtaaacgt
tacttactttgctatggtttaattgtcggcggcatggtgtatattttctcgcaattaccg
tctgctttcttaccagatgaagaccaaggtatattgtttaaccaagtaagcttgccagca
ggctcaaccacggaacaaacgttaaaagtggttgaaaaaatggagcatcacttcttggaa
gatcaatctgaagcagtgaaatctatctttacagtcacaggttttagctttgcgggatct
ggtcaaaatgcagcgattggctttgttggtttaaaacactgggatgaacgtcaacgtcct
gatttatcagtgggcgctgttgcgggtaaagcgatgggatacttctcaacaattaaagaa
gcgtttgtgttcgcgtttccacctcctgcagttgtagaacttggtacagcaaacggcttt
accttatttttacaagaccgcgtagggcttggtcatgataagttacttgaagcacgcaat
atgtttttaggcatggcggctaaaaacccggtgctttcaggtgttcgccctaatggccaa
gaagataaaccagagcttgagctggatattgatttagctaaagcagaagcgcttggccta
acacaaactgacattaacaacacgttatcaacggcgtggggtagtcgctatgtaaatgat
tttattgaccgtggtcgtgtgaaaaaagtgtatttgcaagggactccagaatcacgcatg
gtgcccgaagacctcgataaatggtatgtgcgcaatgcaaacggcgatatggtgccattc
actgcatttgcccattcatattggacttatggctcaccacgcttagagcgctataacggc
ttctcggcgatggagattcaaggtgccgctgcgccaggttacagtacagggcaggcaatg
gttgaggttgaaaaaatagtgaaacagcttccgccaggtgtggcatttgagtggaccggt
atatcgtatgaagagcgtttaagtgggggtcaggcaccgttactttatgcattgtcattg
ctggttgtatttttatgtcttgcggcattatatgaaagttggtctgtgccggctgcggtg
atgctgattgttccactgggtgtctttggtgcgggtgttgcgtcatttgtgtttaattta
tcgaacgacatttacttgcaagttggcttattaacaaccataggtttagcctctaagaat
gcgattttaattgttgaatttgcgattcataaaatggacgaaggtatgaagcttgttgat
gctgcaattgctgctattcgcttacgtttacgcccaatctttatgacgtcaatggcgttc
gtatgcggtgttttaccgcttgcgatagcatcaagtgcaggctcgggagctcaaaatgca
ctcggtattgcagtgattgggggcacgcttgcttcatcaacaatcgtggtgttattcgtt
ccgttattctttgtgttagttcgtcgcgtatttcccggcaaacaaaaagtgaatagtgag
gagcaagcataa
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