Prevotella denticola: HMPREF9137_2030
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Entry
HMPREF9137_2030 CDS
T01459
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
Organism
pdn
Prevotella denticola
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Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
DUF5689
Motif
Other DBs
NCBI-ProteinID:
AEA20257
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Position
complement(2373923..2377231)
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AA seq
1102 aa
AA seq
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MEKRFALFLFGLVLSIGTAFGQTKINGTVFSQDDGEPIIGASVMVQGTTAGTVTDIDGKF
TLDVPAGKKVVVSYIGMVTQTLTPKDGMKVGLTNDNHQLTEVVVTGMTQQDKRLFSGAAT
KIDASKAKLDGMADVSRSLEGRAAGVSVQNVSGTFGTAPKIRVRGATSIYGSSKPLWVVD
GVIMEDVTEVDADNLSSGDAATLISSAIAGLNADDIESFQILKDGSATSIYGARAMGGVI
VVTTKKGKAGSNRISYTGEYTMRLRPSYSQFNIMNSQEQMGIYKEMAADGLFSFSRTLRA
STSGVYGKMYNLLNTYDTTNGRFGIAHNDDAINAYLREAEMRNTNWFKELFSNSISMNHS
ISMSSGTDKAQYYTSFSFMDDPGWAEQSKVRRLTYSINANYNISKKVTLNLIGNTAYRKQ
RAPGSVNQDVDVVSGAVNRNFDINPYSYAINSSRALDPNTFYVRNYAPFNIHHELANNFI
DFDVLDLKVQAELKYKPVSKVQLSVLGAYKYSITSQATQIREGSNMAMAYRAMDDATIRN
ANPWLYLDPDQPNSLKFSVLPKGGFYDETKYRMNSWDFRATASYNDVFNERHIVNFYGGM
EINNTVRTQSYFEGVGMQYGMGYLPNYDYHYFKHAIEDNNLYYDLYNSYNRDVSFFGTAN
YSWKGRYAANFTTRYEGSNRLGKARTARWLPTWNISGVWNAHEEPWFQKTFKNAMTHATL
RASYSLTGDKPAVTNSQVIIRSSNIWRPFAVDKETGLYISRFANPDLTYEKKHEFNIGMD
LGFLNNRLNVVFDWYTRNNYDLIGPRTTNGTKGTITEYANVASMKSHGEELSISSKNILT
KDFQWTTDFIFSHVKTRVTDLDSRSRIMSMVSGSGFTMVGYPYRALFSWEFKGLNKHGIP
QVINQDGELTTSGVDFQSYDLDHLKYEGPTDPTVTGSFGNTFSYKGWHLSIFTTYAFGNK
VRLDPFFSTSYSDMSAMPKEFRNRWTKTGDEAHTTIPAIADLRSIQQDGYLHRAYNAYNY
STERIAKGDFIRMKEISLAYDFPAQLIRHIALSSMSLKLQATNLFLIYSDKKLNGQDPEF
FNSGGVALPVPRQFTLTLRLGI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagatttgcgctctttttgtttgggctcgtcctgtcaatcggcacggcgttc
ggtcagacaaagatcaatggtactgtattttctcaggacgatggtgaacccatcatcggc
gcatccgtcatggtacagggtaccacggcgggaaccgtcaccgacatcgacggaaagttc
acgctggacgtgcctgcaggaaagaaagtcgtagtcagttacatcggcatggtcacgcag
accctcacgcccaaggacggcatgaaggtgggcctcaccaacgacaaccaccagctcacg
gaggtcgtcgtgacgggtatgacccagcaggacaaacgcctcttctcgggtgccgccaca
aagatcgacgcctccaaggcgaagctcgacggcatggccgacgtgagccggtcgctcgaa
ggccgcgccgccggcgtgagcgtccagaacgtctcgggtacgttcggaacggcaccgaag
atccgtgtgcgcggcgccacgtccatctacggttcgtcgaagccgctgtgggtggtcgac
ggagtcatcatggaagacgtcaccgaagtcgatgccgacaacctctcctcgggtgatgcg
gccacgctgatctcctctgccatcgccggactgaacgccgacgacatcgagagcttccag
atcctcaaggacggttccgccacctctatctacggtgcgcgcgccatgggcggcgtgatc
gtcgtcacgacaaagaagggcaaggccggcagcaaccgcatcagctacaccggagaatac
accatgcggctccgcccgagctactcgcagttcaacatcatgaactcccaggagcagatg
ggcatctacaaggagatggccgcagacggactgttctccttctcgcgcacgctgcgtgca
tccaccagcggtgtctacgggaagatgtacaacctcctcaacacctacgacaccaccaac
ggccgcttcggcatcgcccacaacgacgatgccatcaacgcctacctccgggaggcggaa
atgcgcaacaccaactggttcaaggagctgttcagcaattccatctcgatgaaccactcc
atctccatgtcgtcgggtacggacaaggcgcagtactacacctccttctccttcatggac
gaccccggatgggccgagcagagcaaggtgcgccgtctgacctactccatcaacgccaac
tacaacatcagcaagaaggtgacgctgaacctcatcggcaacaccgcctaccgcaagcag
cgggcaccgggatcggtcaaccaggacgtagatgtcgtgtcgggggcagtgaaccgcaac
ttcgacatcaacccctattcctacgccatcaactcctcgcgggccctggatcccaacacg
ttctacgtgcgcaactacgcaccgttcaacatccaccacgagctggcgaacaacttcatc
gacttcgatgtcctcgacctcaaggtgcaggcggaactgaagtacaagcccgtcagcaaa
gtgcagctatccgtgctgggggcctacaaatactccatcacctcgcaggccacacagatc
cgtgagggttccaacatggcgatggcctaccgtgccatggacgatgccaccatccgcaac
gccaacccctggctctacctcgaccccgaccagcccaactcgctgaagttctcggtgctg
ccgaagggcggattctacgacgagacgaagtaccgcatgaacagctgggacttccgtgca
acggcaagttacaacgacgtcttcaacgagcggcacatcgtcaacttctacggcggtatg
gaaatcaacaacaccgtccgcacgcagagctacttcgagggtgtgggcatgcagtacggc
atgggctatctccccaattacgattaccattacttcaagcatgccatcgaggacaacaac
ctgtactacgacctctacaactcgtacaaccgcgacgtttccttcttcggaacggccaac
tactcctggaaaggacgctatgcagccaacttcaccacacgctacgagggcagcaaccgc
ctcggaaaggcacgcacggcacgatggctgcctacgtggaacatatccggcgtgtggaac
gcacatgaagagccgtggttccagaagaccttcaagaacgccatgacccacgccacgctg
cgcgcttcctactcactgacgggcgacaagccggccgtcaccaactcgcaggtcatcatc
cgcagctcgaacatctggcggcccttcgccgtcgacaaggagacgggactctacatctcc
cgcttcgccaatcccgacctgacctacgagaagaagcacgagttcaacatcggcatggac
ctcggcttcctcaacaaccgcctgaacgtcgtcttcgactggtacacccgcaacaactac
gacctcatcgggccgcgcacgacgaacggcacgaagggtacgatcaccgaatatgccaac
gtggccagcatgaagtcgcacggagaggagctttccatctcgagcaagaacatcctgaca
aaggacttccagtggacaaccgacttcatcttctcccacgtgaagacacgcgtcaccgac
ctcgacagccgctcgcgcatcatgtcgatggtcagcgggtcgggattcaccatggtgggc
tatccctaccgcgccctcttctcctgggaattcaagggactcaacaagcacggcataccg
caggtcatcaaccaggacggtgaactcaccaccagcggcgtagacttccagagctacgac
ctcgaccacctgaagtacgaaggccctaccgacccgaccgtcaccggctccttcggcaac
accttctcctacaagggctggcacctgagcatcttcaccacctacgccttcggcaacaaa
gtgcgcctcgaccccttcttcagcacgagctattcggatatgtccgccatgcccaaggag
ttccgcaaccgatggacaaagaccggcgacgaggcccacaccaccatccccgccatcgcc
gacctccgctccatccagcaggacggctatctgcaccgcgcctacaacgcatacaactac
tctacagagcgcatcgccaagggcgacttcatccgcatgaaggagatttccctggcgtat
gacttccccgcacagctgatccggcacatcgcactcagctcgatgagcctgaagctgcag
gcgaccaacctcttcctgatctactctgacaagaaactcaacggacaggatccggagttc
ttcaattcaggaggcgtggccctgcctgtaccccgccagttcaccctgacgctgcggctt
ggaatctga
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integrated database retrieval system
