Parascardovia denticolens: PSDT_0881
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Entry
PSDT_0881 CDS
T03978
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03420
Nucleotide excision repair
pdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSDT_0881
03430 Mismatch repair
PSDT_0881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_0881
Enzymes [BR:
pdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSDT_0881
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSDT_0881
MMR (mismatch excision repair)
Other MMR factors
PSDT_0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
CarD_TRCF_RID
DEAD
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
BAR05400
UniProt:
E6K1R3
LinkDB
All DBs
Position
complement(1069737..1072442)
Genome browser
AA seq
901 aa
AA seq
DB search
MGYKYKNQSFKKSDSRTSAQATGPRPSFVSGSFEGEGLAEGNKPVSAQSLLAGLNQQQAQ
AVQYQGQALLIGAGAGSGKTRVLTRRIAWALSQWHAYPSQILAITFTNKAAREMKERLGS
LIGPVAETMWVSTFHSACVRILRRHGKDIGLSSGFSIYDTADCQRLVKLICQDFNIDSKR
YTPRAVLGAISDWKNSLATWRQKLDEFAPDFHPGVPTHSIGDMGKAERVFAIVYAEYQHR
LGLANAVDFDDLIMRTVELFSTSPEALGYYRHRFRYIFVDEYQDTNHAQYQLVRALSGID
EEKDPSGRPVSGDPLAWVTVVGDSDQSIYAFRGADISNILDFEKDFPQAKTIMLEQNYRS
TQTILDAANAVISRNENRKPKRLWTAMGQGDKIVGFAADNAQQEGQWIAQETARLVEEEG
YAYSDIALMYRANAQSRSLEEAFINAGIPYQLVGGTRFYERKEVKDAIAYLQCIVNPSDD
VNMRRILNVPKRGLGARAESMLNEYASDNGITFWQAAEQAGQIEGMTSRTLKPLAKFREV
MTDLRRFAEENDSHPSSVVAQVLDQSGLVDELKQSLDPQDMTRVDNLSQLQSVAAEYEQN
TPDATVAGFLETTALVTDSDSLPDEGEDRGQVTMMTLHTAKGLEYPVVFLTGMEEGTFPH
SRSLENTDELSEERRLAYVGITRARRRLYLTRASMRAQWGNLQDFMPSQFLDEIPGELIE
WERKETSSERIRSRWEDDGDEFSDGFSFDDDDFGTAFGSSSFPSSSPRPFSSSKPASSRS
AFPHSSSSHSSSSYRNGRVSTQRFLNGSKGSRPTRSSFAKSGMTSSSSGKASSGKSSGGQ
TSAPRLTAAQLVVGDKVIHDQHGLGTVVAVQDKGSNSIATVDFGSAGVKRLLLRLAPIEK
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggttacaagtacaagaatcagagcttcaaaaagtccgattcccggacttccgctcag
gcgaccggcccacggccatcctttgtttccggatcattcgagggggaagggcttgccgag
gggaacaagccggtgagcgcccaaagcctcttggccggcctcaaccagcagcaagcccaa
gcagtgcaataccaaggccaagccttgctgatcggtgcaggggcaggttcgggcaagacc
cgcgtcctcacccgccgcatcgcctgggccctgagtcagtggcacgcttatcccagccag
atcctggccatcaccttcaccaacaaggcggcccgggagatgaaggaacgtctggggagc
ctcatcggaccggtggccgagaccatgtgggtctccaccttccattccgcctgcgtgaga
attttgcgccgtcatggcaaagacatcgggctcagctccggtttttccatctatgacacg
gccgattgccaacgcttggtcaagctgatctgccaggacttcaacatcgactccaagcgg
tacacccctcgggcggtcttgggcgccatatccgactggaagaattccttggccacctgg
aggcagaagctggacgagttcgcccctgacttccaccccggcgtccccactcattccata
ggcgacatgggcaaggcggaacgggtgttcgccatcgtctacgccgaatatcagcaccgg
ctcggcttggccaacgccgtcgacttcgacgatctgatcatgaggacggtcgagctcttc
tccacttcgcctgaggccctaggctattatcggcatcgtttccgctacatcttcgtggat
gaataccaggacaccaaccatgcccaataccaattggtgagggctctgtcagggatcgat
gaagagaaggacccctcgggccggcctgtctccggcgaccccttggcctgggtgaccgtg
gtcggggactccgaccagtccatctacgccttccgcggcgccgatatctccaacatcctg
gatttcgagaaggactttcctcaggccaagaccattatgttggaacagaactatcggtcc
acccagaccattctggatgcggccaacgccgtcatttccaggaacgagaaccgtaagccg
aagcgtttatggacggccatgggccagggggataagatcgtcggcttcgccgcggacaac
gcccagcaggaaggccaatggatcgcccaggagaccgcccgcttggtggaagaggagggg
tacgcctactccgacatcgccctcatgtaccgggccaacgcccagtcccggtcgctggaa
gaggccttcatcaacgccgggatcccttatcagttggtcggagggacccgcttctacgag
cgcaaggaagtgaaggacgccatcgcttatctgcagtgcatcgtgaacccgtcggatgac
gtcaatatgaggcgtatcctcaacgttcccaaaagggggttgggggcccgggcggaaagt
atgctcaacgagtatgcgtccgacaacggcattactttttggcaagcagccgaacaggcc
gggcagattgaggggatgacctcccggacccttaagcccctggccaagttccgcgaagtc
atgaccgacctgcgtcggttcgccgaggagaacgactcccatccttccagcgtcgtggcc
caggtcttggaccaatcgggtctggtggacgagttgaagcagtccttggacccgcaggac
atgacccgggtggacaacctttctcagctgcagtcggtcgccgccgagtatgagcagaac
acgcctgacgccaccgtggccggtttcctggagaccacggccttggtgaccgactccgat
tccctgccggatgaaggggaggaccggggacaggtcaccatgatgaccttgcatacggcg
aaaggcttggaatacccggtcgtattcctcacgggcatggaagaggggaccttcccgcat
tcccgcagtttggagaacacggacgagctctccgaagagaggcgcttggcttacgtgggc
atcacccgggcccgtcgccggctttatctgacccgggcttccatgagggcccagtggggg
aacctgcaggatttcatgcccagccagttcctggacgagattcctggagaactcatcgag
tgggagcgcaaagagaccagttccgaacgcatccgcagccgatgggaggatgatggggat
gagttctccgatggattctccttcgacgatgacgacttcggcaccgctttcggttcgtcc
tctttcccttcgtcctccccgcgacctttctcttcttcgaagccggcatcttctcggtcg
gcttttcctcattcgtcttcctcccactcgtcctcctcctaccggaacggacgggtcagc
acccaacggttcctcaacggatcgaaggggtcgcgcccgacccggtcctccttcgctaag
tcgggcatgacctcctcttccagtggaaaagcatcaagcggaaaatcgtcaggcggacag
acttcggccccccgtctgaccgcggcgcaattggttgtgggggacaaggtgatccacgat
cagcatggtctgggaaccgtggtcgccgtgcaggacaaaggctccaattccatagccacg
gtcgatttcgggtcggccggggtcaagcggcttctgctccgtttggctcccatagagaag
ctctag
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