Polynucleobacter duraquae: CL55_00004390
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Entry
CL55_00004390 CDS
T04207
Name
(GenBank) flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
KO
K02409
flagellar M-ring protein FliF
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CL55_00004390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdq02044
]
CL55_00004390
02035 Bacterial motility proteins [BR:
pdq02035
]
CL55_00004390
Secretion system [BR:
pdq02044
]
Type III secretion system
Flagellar export apparatus
CL55_00004390
Bacterial motility proteins [BR:
pdq02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
CL55_00004390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
DUF6332
Motif
Other DBs
NCBI-ProteinID:
AKD24772
UniProt:
A0A0E3ZL85
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All DBs
Position
412257..414206
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AA seq
649 aa
AA seq
DB search
MSEETQPGLQESERDAAVVNIGSQVAAAPVAPASAFSGGGVALPQSLVGLQNRIKALNAQ
QRLILSAAVFLVIAVLVFVSVSGKSKDDYRILFSSINERDGAAIVAALQQMNVPYKFTEG
GAAILVPESAVYETRLRLAGQGLPKAGNVGFELLENQKMGTSQFVEQVNYQRGLEGELAR
SISSLAQVKSARVMLAIPKQTAFMREQEKPTASVIVTMHPGRFLDPQQVAAITNLVGSSV
PNLGPANVTIVDSEGSLLAPNAQRLAGLDSTQLKYVAELEGALSKRVQSILEPVTGKENV
RAQVTVDMDFGELERTEETFGRNSPPNQSSIRSQQTNEAATPSSTTSGVPGALTNQAPGA
AQAPINTQAATGGAGPQNLNAPPTSSGSSASNIKKDATINYELDRAIQRIKSEKGQVRRV
SAGVVVNYKQPPGVDKEGNPRKPIPYNAKELDQINNLVRDAVGFSEKRGDSVSVANIPFK
VEVSDEPPFYKQAGVIELSKEFFKFAIILGSLGLMFFGVVRPLLFPPKKDEVMEEQRIEE
EFDEKIKAEMAQMDPRAREKRRMEVELLRERQRLAEEEERARAEEDRKRTEEERKRIDEE
KKQEYEELLQYAKDFVENNPRAVSAIFKEWLSEDAAKQNAGNAEAAPAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagaaacgcaacccggattacaggaaagcgaacgagatgcggcagtagtcaat
attggctcgcaggtggccgctgccccagtagctccagccagcgcttttagcgggggcggt
gtagccctcccccaaagtttagttggcctacaaaatcgcataaaagcactcaatgcccag
caacgtctaattttgtcagcagcagtatttttggtcattgctgtactggtatttgtttct
gtctctggaaaaagcaaagatgactatcgcattttgttctcgagcattaatgagcgagat
ggagcggcgatcgtagcggctttgcagcaaatgaatgtgccttataagttcaccgaaggc
ggggcggccatattagtgcccgaatcagcggtttatgaaactcgcctccgtttggcgggt
cagggcctacccaaggctggtaatgtgggttttgagctgcttgaaaaccaaaaaatggga
acgagccaatttgttgagcaagttaactaccagcgtggtttagaaggtgagttagcccgc
agtatcagctccttagcgcaagtcaaatctgcaagagtgatgttggcaattcctaagcaa
accgcatttatgcgcgaacaggaaaagccgacggcctccgtcatagtgacaatgcatcct
ggacgttttttagatcctcagcaagttgcagcgattaccaatttggtgggctcctccgtt
ccaaaccttggtccagcgaatgtcacgattgtcgattcggaaggcagtttgcttgcccct
aatgcacagcgtctggcaggcttagacagcacgcaactaaagtatgttgccgaacttgag
ggtgcgctatccaagcgagtgcaatcgatcctagagcccgtcactggtaaggaaaatgtc
agagcccaagtcacggtcgatatggattttggcgaactagaaagaactgaagaaactttt
ggtcgtaattcgccacccaatcaatcttcgattcgcagtcaacaaaccaatgaagctgcc
acacccagctcgactacctctggtgttcctggcgctttaaccaatcaagcaccaggtgct
gcgcaagcgccgattaatactcaagcggctactggcggagcgggaccacaaaatctcaat
gcacctcctacaagttcaggttctagcgcgagcaatatcaaaaaagatgccacgatcaac
tatgagcttgaccgggctattcagagaattaagtctgaaaaaggtcaagttaggagagtg
tctgctggcgtggtggtgaactacaaacagccccctggcgttgataaggaaggcaatcct
cgaaagccaattccctacaatgctaaagagcttgatcaaatcaataatttggtaagagat
gctgtgggtttttcagaaaagcgtggagatagtgtcagtgttgccaatatcccatttaag
gttgaagtgagtgatgaaccaccattttataaacaagctggggtcattgaattaagcaaa
gaatttttcaagtttgcaattattttaggttcgcttggtttaatgttttttggagtcgta
cgtcccttactctttcctcccaaaaaggacgaggttatggaagagcagcgtattgaggaa
gagtttgacgagaagattaaagctgaaatggcgcagatggatcctcgggcgcgtgaaaag
cgccgtatggaagtggagctcttgcgtgagcgccagcgccttgctgaagaagaagagcgt
gctagagctgaagaagatcgaaaacggacagaggaagagcgcaaacggatcgacgaagag
aagaagcaagagtacgaagagctacttcagtacgcgaaagattttgtggaaaataatcct
cgagctgtttctgcaattttcaaagagtggctgtctgaagatgcggctaagcaaaatgct
ggtaatgctgaagctgcgcccgccgcataa
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