Polynucleobacter duraquae: CL55_00015320
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Entry
CL55_00015320 CDS
T04207
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdq03009
]
CL55_00015320
Enzymes [BR:
pdq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CL55_00015320
Ribosome biogenesis [BR:
pdq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CL55_00015320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
AKD25865
UniProt:
A0A0E3ZMW8
LinkDB
All DBs
Position
complement(1492546..1493565)
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AA seq
339 aa
AA seq
DB search
MKSEPISKPLQVKTSAPAAVHFQTIGPEEAGQRLDNYLLRWAKGVPKSHVYRIIRSGEVR
VNKKRAEPTTRLIEGDVVRVPPVRIAEPAQMAAVNTAQTKSRAQGYSDKMPILFEDEALL
IVNKPAGLAVHGGSGIALGVIETLRITRPELKFLELVHRLDRDTSGVLLLAKKRSALVEL
HRQIREGQTDKRYYLLAHGEIAQGAGTMQLKFALHKYLLANGERRVRVDPDGLPSHTALR
VTKVMKRGEVAITLAEAQLKTGRTHQIRVHLQKLGHSILGDDKYGFEDQDKILKSKRLYL
HAHLAGFTHPRTGEKMRIESPLPSEFAAMMKTFEVPTHV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgaacccatttccaagcccttgcaggtcaaaaccagtgctccagccgccgtt
cattttcagaccattggtccagaagaggctggtcagcggctggataactaccttctacgt
tgggcaaaaggggttcctaaaagccacgtttatcggattattcgctctggcgaggtccgg
gtaaataagaaaagggctgaaccaactacgcgtctgatcgagggggatgtggttagagtc
ccgcctgttcgtattgccgaacctgcccaaatggcagcagtcaataccgcccaaaccaag
tctcgggcgcaggggtattccgacaaaatgccgattttgtttgaagatgaggcgctatta
attgtaaataaacccgcaggtttggcagtgcatgggggttcaggaatcgcgcttggcgta
attgaaaccctgcgtattacccgccctgagctcaaattcttagaattggttcaccgtttg
gatcgagacacatccggcgtgttgctcttagccaaaaagcgcagcgctttggtagaactg
catcgccagattcgcgaagggcaaaccgacaaacgctactatttattagcccatggcgaa
attgctcagggcgcaggcacgatgcaactgaagtttgcattacacaaatacctattagcc
aatggcgagcgtcgcgttcgtgttgacccagatggtctgccaagtcataccgctttgcgg
gtcacgaaagtgatgaaacgtggggaggtggcgatcactctggctgaggcccaactcaaa
actgggcgtactcatcaaatccgcgtacaccttcaaaaattaggccactcgattttgggt
gacgataaatacggctttgaagaccaagacaagattctgaaatccaaacgcctgtatttg
catgcccacttagcaggctttactcatccccgtactggcgagaaaatgcgtatcgagtcc
ccattaccctctgaatttgcagcaatgatgaaaacttttgaagtgcccactcatgtctga
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