Paenibacillus durus: PDUR_20930
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Entry
PDUR_20930 CDS
T03297
Name
(GenBank) HemD protein
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00860
Porphyrin metabolism
pdu01100
Metabolic pathways
pdu01110
Biosynthesis of secondary metabolites
pdu01120
Microbial metabolism in diverse environments
pdu01240
Biosynthesis of cofactors
Module
pdu_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
pdu_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PDUR_20930
Enzymes [BR:
pdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
PDUR_20930
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PDUR_20930
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
DAHP_snth_FXD
Radical_SAM
DUF834
Motif
Other DBs
NCBI-ProteinID:
AIQ14102
UniProt:
A0A089HSN9
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Position
complement(4622324..4623871)
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AA seq
515 aa
AA seq
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MAGKVYLVGAGPGDAKLITIKGMECIKKADVLVYDRLASPRLLKWMPPGGEKIYVGKLPD
RHTMKQEEINQLLVDLALQGKTVVRLKGGDPTIFGRVGEEAELLRRNGISYEIVPGITSA
ISVPAYAGIPVTHRDYASSLSIITGHESPDKLDRSIHWDKVTNATGTLVFLMGVAKIGYI
SSNLIKHGRPPETPVALVRWGTRAEQETLIGTLADIEEKVKAANFGSPAVIVVGDVVKQR
EELKWAEELPLFGKRILVTRARSQASELVDRIEELGGEPYEFPVIETVMPESAEKREAIA
SALTKLPEYDWVFFTSVNGVEFFFRHLAELKADIRGLSRARIAAVGPATAEALAQRGLMT
EELPARFQAEGLIEAYGDRLLPGQKALLPRGDLAREWLPQKLTELGLAVTEIDTYETIVT
GEDDVELMKLLEEGRIHAVTFTSSSTVRNFLDILKRMGLTDPLPLLENVKMACIGPITQQ
TAVEAGLTPGLLAEEATIDSLVNELCRWNEQTKNR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaagtgtatttggtgggcgcgggccctggggatgcaaagctcattacgatc
aaaggcatggaatgcatcaaaaaagcggatgtgctggtctacgaccggctggcaagtccc
aggctgctgaaatggatgccccctggcggagagaagatttatgtgggcaagcttccggac
cggcatacgatgaagcaggaggaaattaatcagctgctcgtcgatctggcgcttcagggc
aagactgtggtgagattaaaaggcggcgatccgacgatttttggccgggtgggcgaggaa
gcggagctgctgcgaagaaacggcatttcctacgagatcgttccgggcatcacgtcggcg
atcagcgtgccggcttatgccggcattccagtaactcaccgcgattatgcttcttctctg
tcgattattaccgggcacgaaagcccggacaagctggaccgctcgattcattgggataaa
gtaacgaatgccacgggcacgcttgtcttcctaatgggagtcgccaaaatcggctatatc
agcagcaatctgattaagcacggccgcccgccggagacgccggtggcgctggtgcgttgg
gggacgcgcgcggagcaggagacgctgattggcacactcgccgatattgaagagaaagtg
aaggcggcgaatttcgggtcgccggccgttatcgtcgtcggcgatgtggtgaagcagcgg
gaggaactgaaatgggccgaggagctgccgctgttcggcaagcggattcttgtcacccgg
gcgcgcagccaggccagtgaactggtggaccggattgaggaactgggcggagagccttac
gaattcccggttatcgagacggttatgccggagagtgcggagaaaagagaggcgattgcc
tcggcgctcacgaagcttccggaatatgattgggtgttctttacgagcgtaaacggagtg
gagttcttcttccgccatctggcggagctaaaagcggacattcgcggcctgtcccgcgcc
cgtatcgccgccgtcggtcccgctactgccgaagcgctcgcccagcgcggccttatgacg
gaagaactgccggcaaggttccaggcggaagggctgatcgaagcatatggtgatcggctg
ctgccgggacagaaggcgctgctgccgcgcggcgatctggcaagggaatggcttccgcag
aagctgactgagctggggcttgcggtgacggagatcgatacgtacgagacaatcgttacc
ggtgaggatgatgtagagctcatgaagctgctggaagaggggcggatacatgctgtcacc
tttaccagctcctccaccgtgcgtaattttctcgatatcctgaaaaggatgggactaacg
gacccgctgcctttgctggagaacgtcaagatggcctgcatcggcccgatcacgcagcag
acggcagtggaagccggactgactcccggattgctggcggaggaggccacgatcgactcg
ctggtgaatgagttgtgccgttggaacgagcaaacgaagaaccggtaa
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