Prunus dulcis (almond): 117626801
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Entry
117626801 CDS
T07328
Name
(RefSeq) homeobox-DDT domain protein RLT1
Organism
pdul
Prunus dulcis (almond)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WSD
DDT
HARE-HTH
Homeodomain
WHIM1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117626801
NCBI-ProteinID:
XP_034214534
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All DBs
Position
4:complement(2682298..2692759)
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AA seq
1764 aa
AA seq
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MEGASEGENPTKNHENNNSNGKFNNSSEGQSKPKRQMKTPFQLETLEKAYALETYPSEAI
RAELSEKLGLTDRQLQMWFCHRRLKDKKEGGPTKKQRKSVPTLPEPPIDDLAHGSEPGSD
YGSGSGSGSSPFGHAELRNVVSRSGADDVPMRRRYYESPQSILELRAIACVEAQLGEPLR
EDGPVLGVEFDRLPPDAFGAPIVAEQQKRAAHALEGKYERHDAKPNKATPRALHEYPFLQ
DHSSIRSDAYGQAAQSHFQDSPIDGPSARASSFAVGNEPLSRVHGVHGHGHVSRVRLLSQ
QERQAVAFPSPGDDGCVPQRDSFTNVRVNTQFSDPPTVAPENSNVLSDGQINDSMLRMER
KRKSEEARIAKEVEAHEIRIRKELEKQDILRRKNEERMRKEMERHDRERRKEEERLMRER
QREEERSKREQKREIERREKFLQKEYIRAEKRRQKEELRKEREAVRRKAALEKATARRLA
KESMELIEDEQLELMELAAASKGLSSIICIDLDTLQNLDAFRDSLAAFPPKSVQLKRPFA
VQPWINSEENIGNFLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLRL
IIKDIEDVARTPSTGLGVNQNGAANPGGGHPQIVEGAYAWGFDIRNWQQHLNLLTWPEIF
RQLALSAGFGPQLKKRSTAWSYSPDNDEGKGCQDAISNLRNGSAAENAFAIMQEKGLLAP
RKSRHRLTPGTVKFAAFHVLSLEGNKGLTVLELADKIQKSGLRDLTTSKTPEASISVALT
RDTKLFERIAPSTYRVRAAYRKDPADAEAILSAARKKIQIFENGFLAAEDADDVERDDAD
EVENDEVERDEDFECDEVDDDPEVDDLATPSVAKKSPDDYNEVITFSENGKDLCNDVALN
VQNEFENDVSSSPVSGSKDANCPSASSKQCVSGADFSASNLDQENMEIDESKSGESWVQG
LTEGEYSDLSVEERLNGLVTLIGVANEGNSIRVVLEDRLEAANALKKQMWAEAQLDKSRL
KEENVGKLDFPSFVGGKSETQVIGVEDGQSPVRDVDNRNIEASPGTAENQKSIHGSQGVQ
NQLNGLPVERTLGTQDISMGPDNFLSQQLAYASKRSRSQLKSYIAHRAEEMYAYRSLPLG
QDRRHNRYWQFVASASSNDPGSGRIFIELNNGSWRLIDTEEAFDALLTSLDTRGIRESHL
RLMLQKIEASFKENVRKTSHCPNSAGPSKNRVKNEADMDSSPDCPSGFDSPGSTVCALNS
DTAETSSSFRIELDRNEAEKRAALRRYQDFQKWMWKECFSSSTFCAMKYAKKRCRSLFDV
CDFCLSCYYFEDSHCAFCHQTFSAFYANFNFSEHVIQCKEKRKLEPWDSHMPCTSLPLAR
RLLKALIALIEVSIPPEALQSFWTEDRRKTWGGKLNASSSTEELLQILTLLETAVKRDFL
SSNFAATEELLGTSKQSEVFVPDFLDSGSVPLLPWIPHTTAAVALRLHEMDSSITHIQLE
KAEPNRDKEVKEYLKLPMRLAPLKESEQTEVGHNEYIREENNTHLKSARNSFRRGRGGRE
QGRGKKWQRKVNNSKSGASRQKGSGNLNQGFRPVGKRTQGQGSARGRRTVRKRRTKDRAV
EGTPLGRMTDVRSSPESGGESPRNLGEEWDDEKIDMIHMKGDEQREGYEQAEALESEDDD
QAVGYEQGNWETGFDGTSSGWHESLLEASDEDMDASEDDNNGIEEVRDEDSEGDVDMSDA
SDEIQNKITNDDGSDSAVSDDYSD
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgcttccgaaggagaaaatccgactaaaaatcatgaaaataacaacagtaat
gggaaatttaataattccagtgagggacagagcaagcccaagcgccagatgaagaccccc
tttcagcttgaaaccctcgagaaagcttatgccttggagacctacccgtcggaggcgata
agggcggagctgtcggaaaaattagggcttactgatcggcagttgcagatgtggttctgt
cacagaagattgaaggacaaaaaggaagggggtccaacaaagaaacagcggaaatcggtg
cccactttgcccgagcctcctattgatgatttggctcacgggtctgagccaggtagtgat
tatgggtcgggttcaggctccggctcaagcccgtttgggcatgcggagttgcggaatgtg
gtttccaggagtggggctgacgacgtgccaatgaggaggaggtattacgagtcaccccag
tcgatattggagcttagagccattgcttgtgtggaagctcaattgggagagccattgagg
gaagatgggccagttctcggcgtagagttcgatcggttgccgccagatgcgttcggggca
cctatagttgcagagcagcagaagcgggctgcccatgctttggagggcaaatatgagcgg
catgatgcaaaaccaaataaagcaactccaagggctctccatgagtatccatttcttcaa
gatcactccagtattcggtctgatgcatatggacaagccgcacaatctcattttcaagat
tcaccaattgatggtcctagtgccagagcttcatcatttgcagttggaaatgagcctttg
tcaagggttcatggtgtccatggtcatggtcatgtgtcgcgtgttcgtcttctgtctcag
caggagaggcaagcagtggcctttccatctcctggtgatgatggctgtgtgccacaaagg
gactcctttactaatgttagagtaaatactcagtttagtgatcctcctactgttgcaccg
gaaaactctaatgtattgtctgatggtcaaattaatgactctatgctgagaatggagagg
aaacgcaagagtgaagaagctagaattgctaaagaagttgaagctcatgagattcggatc
cggaaggagctggagaaacaggatattctgaggagaaagaatgaggaacgaatgaggaaa
gaaatggaaaggcatgaccgtgagagacgaaaagaagaagagaggttgatgcgtgaaagg
cagcgagaggaagagagatcaaagcgtgagcaaaaacgtgaaattgaacgaagggaaaag
tttttgcagaaagaatatataagagctgagaaaaggaggcaaaaggaagagcttcgcaaa
gagagagaggcagtgagacgcaaagcagcacttgagaaggctactgcacgcaggcttgct
aaagaatctatggagcttattgaggatgagcaactagaactaatggaattggctgctgca
agcaagggtttatcctcaatcatttgtattgatcttgacaccttgcaaaaccttgatgca
ttcagagattctctggctgcattcccacctaagtctgtgcaattaaaaagaccatttgca
gttcagccgtggatcaactcagaggagaatattggtaacttcctaatggtttggagattt
ttgattacctttgctgatgttctcgagttatggccttttactcttgatgagtttgttcaa
gcttttcatgactatgattcaaggttgttaggagagatccatgttgctctcttgaggttg
attataaaagatattgaagatgttgcaaggactccttctactggattaggagtaaatcaa
aatggtgctgctaatcctggtggtggacatccacagattgttgaaggagcatatgcatgg
ggctttgatatacgaaactggcagcagcacttaaatctgctaacatggccagaaatattc
cggcaactagcactgtctgccggatttgggccacagttgaagaaaaggagtaccgcatgg
tcatactctcctgataatgatgagggtaaaggttgtcaggatgcaatttctaatcttcgc
aatggttcagcagctgaaaatgcatttgcaataatgcaagaaaaaggcttactagcccca
cgaaaatctagacaccggttgactcctggaactgtaaaatttgcagcttttcatgtgctt
tcacttgagggaaacaagggactaacagtgttagagcttgctgacaagattcagaaatct
ggccttcgggacctgacaacaagcaagactcctgaagcttcaatttctgttgctttgaca
agagatactaagcttttcgaaagaatagctccttcaacatatcgcgtacgagctgcttac
agaaaggatcctgctgatgccgaggccatactttctgcagcacggaagaaaattcagata
tttgaaaatgggtttttagctgcagaagatgccgatgatgttgaaagagatgatgctgat
gaggttgaaaatgatgaggttgaaagagacgaagactttgaatgtgatgaagttgatgac
gatccagaagttgatgacttagctactccatcagttgcaaagaaatcccctgatgattac
aatgaagtaattactttctcagaaaatggaaaggatttatgcaatgatgttgcactgaat
gtgcaaaatgagtttgaaaacgatgtttcatcttccccagtgagtggttccaaagatgca
aactgccctagtgcttcctctaaacagtgtgtttcgggtgcggattttagtgctagtaat
cttgaccaagaaaatatggagattgatgaaagcaaatcaggtgagtcatgggttcaagga
cttacagaaggggaatattctgatctcagtgtggaagagcgtcttaatggcctggttacc
ttaattggtgttgcaaatgaaggaaactccatccgtgttgttcttgaggatcgcttagaa
gctgcaaatgctcttaagaagcaaatgtgggcagaagcacagcttgataaaagtcgccta
aaagaagagaatgtcggtaagttagattttccatcttttgtgggaggcaaatctgaaaca
caagttatcggagtggaggatggacaaagccctgtacgggatgttgataatagaaatatt
gaagcatctccaggcactgcagaaaatcaaaagtcaatccatggttcacaaggggttcag
aatcagcttaatggtttgcctgttgaaaggactttaggaacccaagatatttccatgggt
cctgacaacttcttgagtcagcaacttgcatatgcatcaaaaaggtcgcgctcacagtta
aaatcatatattgcacatagagcagaagagatgtatgcatataggtccctgcctcttggt
caagatcgcaggcataatcgatactggcaatttgttgcatctgcatcaagcaatgatcct
ggttcaggcaggatttttattgaattgaataatggaagttggaggcttattgacactgaa
gaggcctttgatgctctattgacgtctctggacacacgtgggattagggaatcccatcta
cgcttaatgttgcaaaagattgaggcatccttcaaggagaatgttcggaaaacttcacat
tgtcctaacagtgcaggcccaagtaaaaaccgtgttaaaaatgaagccgacatggattct
agccctgattgcccttctggtttcgacagccctggcagtactgtttgtgctttgaattct
gatacagcagagacatcctcttctttcagaattgagcttgacagaaatgaagcagaaaaa
agggctgccttgagaaggtatcaagattttcagaagtggatgtggaaagaatgctttagc
tcatctacattttgtgccatgaagtatgcgaagaagaggtgcagatcactgtttgatgtt
tgcgatttctgccttagttgttactacttcgaagattcccactgtgctttttgccatcag
actttcagtgctttctatgcaaattttaactttagcgaacatgtgattcaatgtaaagaa
aaaaggaagttggaaccttgggattcccatatgccatgtacttctcttcccttggccaga
agattgctcaaggcattaatagctcttattgaggtatctattccaccagaagctcttcaa
tcattttggactgaagaccgtcgaaagacctggggtgggaaactgaatgcatcatcatca
acggaagaacttctacagatattgactctgcttgagactgccgtgaagcgagactttctg
tcatcaaactttgcagcgacggaggaattacttggcaccagcaaacaatcagaggttttt
gttcctgactttctagacagtggatcagttcccctacttccttggataccacataccact
gcagctgtggctctgaggcttcatgagatggattcatcgattacacatatacagcttgag
aaagctgagcccaacagagacaaggaagtcaaagaatatctgaagctccctatgagactt
gccccactgaaagagtctgaacaaacagaagtaggccacaatgaatacattcgggaagag
aacaatactcacctgaaaagtgcacgaaacagctttagacgtggtaggggaggtcgtgag
caagggcgcggtaaaaagtggcagagaaaagtgaataattccaaatctggtgcaagtcgg
caaaagggtagtgggaatctgaatcaagggtttagaccggttgggaaaagaacacaagga
caagggagtgcacggggtcgcagaactgttagaaagaggagaacaaaggacagggctgtt
gaggggacacctctgggccgcatgactgacgtacgcagtagccctgagagtggaggggag
tccccgagaaacttgggtgaggaatgggatgatgaaaagatagatatgatccatatgaaa
ggtgatgaacaaagagagggatatgaacaagcagaggcattggaatctgaagacgatgac
caagcagtgggatatgaacaaggaaactgggaaactggatttgatgggacttccagcgga
tggcacgagagtttactggaagcaagtgatgaggatatggatgcttctgaagatgacaat
aatggcattgaagaagtgagagatgaagattcagagggggatgtagatatgagtgatgcc
tcggatgaaatacaaaacaagattacaaatgatgatggctcagattctgcagtttcagat
gactatagtgattga
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integrated database retrieval system