Prunus dulcis (almond): 117634661
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Entry
117634661 CDS
T07328
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117634661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117634661
03051 Proteasome [BR:
pdul03051
]
117634661
Membrane trafficking [BR:
pdul04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117634661
Proteasome [BR:
pdul03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117634661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
TBK1_ULD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
HOIP-UBA
XPC-binding
Motif
Other DBs
NCBI-GeneID:
117634661
NCBI-ProteinID:
XP_034224733
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Position
7:16513640..16518747
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AA seq
543 aa
AA seq
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MGGGGEGSVDDGTYSDDGDGVKVNVNVRCSNGSKFTVQINLESTVGSFKEVLSSKCDIPA
DQQRLIYKGRILKDDQTVESYGLEADHTVHLVRGFAPPASSNPAGATNAGAANSTQARGV
GSNDGGTLGGSGFGASPFPGLGLNGMGGTGGLFGAGLPDFEQVQQQLTQSPSVMRDIMNT
PAVQNLMNNPDIMRNLIMNNPQMREIIDRNPELAHVLNDPGTLRQTLEAARNPELMREMM
RNTDRAMSNIEATPEGFNMLRRMYENVQEPFMNATTMAGNAGSDGSNPFASLFGAQGGNQ
TRSDSMNGSPAPNTNPLPNPWSSTGTAGVAETNTTASNPISDATLQTPTPILNFPEFEAL
GALPQDYNSMNQFMQNPAVSQIMQSLISNPQYMNQILGSNPQFRSMLDSNSHLREMMQNP
EFLRQLASPETMQLLLTVQQSLMSQFGRQQQQSTQETGQTGGTTGSFNNTGLEMLMNMFG
GLGTGSLAVPNRPDVPPEELYAAQLSQLQEMGFFDRQENIRALMATAGNVHAAVERLLGN
SGL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggaggtgagggttctgtggacgacgggacctactccgacgatggagatgga
gtcaaggtcaatgtcaacgtcagatgctccaatggctccaagttcaccgttcagattaac
ctcgaatccaccgttggatcgttcaaggaagttctctcatcaaaatgcgacattccggcc
gatcagcagcgtctgatttacaagggtcggatcttaaaggacgatcaaaccgtcgaaagc
tatggtttggaggcagatcacactgttcacttggttcgtggttttgcaccgcctgcgtca
tccaaccctgctggtgcaaccaatgctggagctgcaaattccacccaagcaaggggtgtt
ggatccaatgatggtgggacattgggagggtcaggttttggagcctcaccattcccagga
ctcggacttaatggtatgggtggcactggtggtctgtttggagctggacttcctgacttt
gaacaagtgcagcaacaattgactcagagccccagcgtaatgagagacataatgaacacg
cctgccgttcaaaatcttatgaataaccctgacataatgcggaacttgattatgaacaac
cctcaaatgcgtgaaattattgatcgaaatcctgagctagcacacgtacttaatgatcct
ggcacgctccgtcagacacttgaagcagcaagaaaccccgagcttatgcgtgagatgatg
cgtaacactgacagagccatgagcaacattgaagctactcctgagggatttaacatgctc
aggcggatgtatgaaaacgtacaagagccatttatgaatgcaacaacaatggctgggaat
gctggaagtgatggttcaaacccatttgcatctctttttggggcccaaggtggcaaccaa
accagatctgattcaatgaatggttctcccgctccaaatactaacccgcttcccaaccca
tggtcctctacaggcacagctggagttgccgaaactaataccacagcatcgaatcctatc
agtgatgctacgctgcagacaccaactcccatacttaactttccagagtttgaagcattg
ggtgccctgccacaggattacaattcaatgaatcagtttatgcaaaatccagctgtttct
caaataatgcagagcctcatctccaatcctcagtatatgaaccagattctaggttccaac
ccccagtttcgaagcatgcttgattccaattctcatttaagagaaatgatgcaaaaccct
gaatttcttcgtcagttggcttctcctgagactatgcagctgctcttgactgtgcagcaa
tcacttatgtctcagtttggtcggcaacagcaacagtcaacccaggaaacaggtcagact
ggtggaaccacaggatcattcaataacacggggctagagatgctgatgaacatgtttggt
gggcttggcactggcagcctggctgttcccaataggcctgatgtgccaccggaagaactc
tatgctgcacagctttcacaacttcaggagatgggtttctttgaccgacaagagaacata
cgggctctgatggccaccgcaggaaacgtccatgcagcagtagagcgacttttagggaat
tccggtttatag
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