Pseudomonas donghuensis: BV82_0672
Help
Entry
BV82_0672 CDS
T07361
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdw03016
]
BV82_0672 (rnd)
Enzymes [BR:
pdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BV82_0672 (rnd)
Transfer RNA biogenesis [BR:
pdw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BV82_0672 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
KDO01713
LinkDB
All DBs
Position
1575020..1576153
Genome browser
AA seq
377 aa
AA seq
DB search
MAIDIHWICDDRSLAEHCQQWRTLPFVALDTEFMRVDTFYPKAGLIQVGDGARAYLIDPL
RIGDWQPLAGLLEDPQVIKVLHACSEDLEVLSRLTGSLPAPLFDTQLAAGYLNLGFSMGY
SRLVQEVLGIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELYERLRPQLSADKHAWV
LEDGAELVAQLRRETDPYELYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRIV
RENALWPMARTQPDSLSALAKIEDMHPRTIRQDGEFLLGLIKQAASLPPEQWPPAVPEPL
PIEASALLKQLRAIGQAEAERLSIAPELMLRKKPLELLLKSGYPNGPYQLPESLRGWRRE
RMGQALLDCLAGAGDPS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggatttgtgacgaccgcagcctggcagagcattgccagcag
tggcgcacgctgcccttcgtggcactcgacaccgagttcatgcgggtcgataccttctat
ccgaaagccggtttgatccaggtcggtgacggggcgcgggcctacctgatcgacccgctg
cggatcggcgactggcagccgctggccggactgcttgaagatccgcaggtgatcaaggtc
ctgcatgcctgcagcgaagacctcgaagtgctgtcgcgcctgaccggcagcctgccggcg
ccattgttcgacacccagctggccgccggttacctcaacctgggtttctccatgggctat
tcgcgcctggttcaggaggtgctcggcatcgacctgcccaagggcgaaacccgttccgac
tggctgcaacgcccgttgtcggaaacccaggtcagctacgctgccgaagacgccgtgcac
ctggccgaactgtacgagcgcctgcgcccgcagctgtccgccgacaaacacgcctgggtc
ctcgaggacggtgccgagctggttgcccagttgcgccgcgaaaccgacccgtacgagctg
taccgcgaggccaagctggcctggaagctgtcgcgcgcgcaactggcggtactgcgcgag
ctgtgcgcctggcgcgaacgcgaagcccgtgcccgcgacctgccgcgtaaccgcatcgtc
cgcgaaaacgccttgtggcccatggcccgcacccagccggattcgctgtcggcgctggcc
aagatcgaagacatgcacccgcgcaccatccgtcaggatggcgagttcctgctcggcctg
atcaagcaggctgccagcctgccgccggagcaatggccgccagcggtgcccgagccgctg
ccgatcgaagcctcggcgctgctcaagcaactgcgcgccatcggccaggccgaggccgaa
cgcctgagcatcgcccccgagctgatgctgcgcaagaaacccctggaactgctgctcaag
agcggttaccccaacggaccctatcaactccccgagtcgctgcgcggctggcgccgtgag
cgcatggggcaggcgctgctcgattgcctggcgggcgccggagacccttcatga
DBGET
integrated database retrieval system
