Pseudomonas donghuensis: BV82_1707
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Entry
BV82_1707 CDS
T07361
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00521
Streptomycin biosynthesis
pdw00523
Polyketide sugar unit biosynthesis
pdw00541
O-Antigen nucleotide sugar biosynthesis
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01250
Biosynthesis of nucleotide sugars
Module
pdw_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BV82_1707 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BV82_1707 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BV82_1707 (rfbC)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BV82_1707 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
KDO00613
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All DBs
Position
5486174..5486719
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AA seq
181 aa
AA seq
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MNVITTDLPGVLIIEPRVFGDSRGFFYESFNADVFKEKTGITSTFVQDNHSRSQKGVLRG
LHYQLENTQGKLVRVTQGEVLDVAVDIRRSSPHFGNWVAVRLSADNHRQLWVPEGFAHGF
VVLSDNAEFLYKTTDYYNPAAERCIRWDDPDLAIDWQLDEAPQLSAKDQAGKWLTEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaatcactactgatctgcccggcgtactgatcatcgaacccagggtgttcggc
gacagtcgcggatttttctatgaaagcttcaacgccgacgtattcaaggaaaaaactggc
atcaccagcacatttgtccaggacaaccactcacgctcacaaaaaggtgtcttgcgcggg
cttcactaccaactggaaaacacccaaggcaagctggttcgtgtgacccagggggaagta
ctggatgtagctgtggatatccgccgcagttcccctcatttcggcaattgggtcgcggtc
aggttgtccgccgacaaccaccgccaactctgggtgcccgaaggcttcgcccatggtttt
gtcgtgcttagtgataacgccgagttcctgtacaagaccaccgactattacaacccggcg
gccgaacgctgcattcgctgggacgatccggatctggccatcgactggcaactggacgaa
gcaccgcaattgtctgccaaggaccaggccggaaaatggttgacggaggcggacctgttc
ccatga
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