Pseudomonas donghuensis: BV82_2864
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Entry
BV82_2864 CDS
T07361
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdw03000
]
BV82_2864
Transcription factors [BR:
pdw03000
]
Prokaryotic type
Helix-turn-helix
Other families
BV82_2864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
HTH_23
PAS_4
HTH_30
HTH_17
HTH_28
IclR
AbiEi_4
HTH_7
AAA_16
HTH_20
HTH_50
HTH_22
PAS_5
Motif
Other DBs
NCBI-ProteinID:
KDN99652
LinkDB
All DBs
Position
790360..792234
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AA seq
624 aa
AA seq
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MLAANSKAHVDCVSRVLKNAERLPQVPVPPLILDSWRRSMEQHRLDPASQQGPRILSQSL
LDECRERSELFLRIAGDAVARLHGRVRDADYCVLLTDAQGRTIDYRVEPTIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPATVHKRDHFRAAFIGLTCSAAPVFDPRGELLGVVD
VSALQSPDDRRSQHLIRQMVVQSAREIENAFFMHSAEPHWVLRAHSTPGYVDSQPDYLLA
WDADGRLQALNSQARKVLLERYGQLPEHIGELFDLDALRAATDESAQRLRWRGESGELHV
RISSPRRKLGRRSAAIARQPVDERVEHSLRLATRVKDCNLAVLVLGETGSGKEVFARQLH
AMSQRSRKPFVALNCAAIPENLIESELFGYVAGAFTGASSKGMQGLLQQADGGTLFLDEI
GDMPLNLQTRLLRVLAEGEVAPLGASARQRVDIQVICATHRDLTAMVAAGSFREDLYFRL
ANARFELPPLRERSDRLALINQLLGEEAKGCGVDVGLSDGALQALLNYPWPGNLRQLRQV
LRYACAICSGSTLQLDDLPLEIRGGQVQAQVQASVSPARQQLLDALIRHRWKPGETAKAL
GISRATLYRRVHEHRIEMPRMTKS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactccaaagcccacgtcgactgtgtcagccgcgtgctgaagaacgcc
gaacgcctgcctcaggtgccggtgccgccgctgatcctcgactcctggcgtcgctcgatg
gagcagcaccggctcgaccctgcgtcccagcaggggccgcgcatcctctcgcaaagcctg
ctcgacgaatgccgcgaacgttccgagctgttcctgcgcattgctggcgatgcggtggcg
cgtctgcacggacgggtgcgcgatgccgactattgcgtgctgctgaccgatgcccagggg
cggaccatcgattaccgggtcgagccgaccatacgcaacgactgtcgcaaggccgggctg
tacctgggcacctgctggtcggagggcgaggagggcacttgcggagtggcggcggtgctg
accagcaaggcaccggcgacggtgcacaagcgcgatcattttcgtgccgccttcatcggc
ttgacctgctcggcggcgccggtgttcgacccccggggcgagctgctcggcgtggtcgat
gtctcggcgctgcaatcaccggacgatcggcgtagccagcacctgatccggcagatggtg
gtgcagagcgcgcgggagatcgagaacgcgtttttcatgcacagtgccgaaccgcactgg
gtgctgcgtgcccacagcacgccgggttatgtcgacagccagccggattacctgctggcc
tgggatgccgatggccgattgcaggcgctcaacagccaggcgcgtaaggtgctgctggaa
cgttacgggcagctgccggaacatatcggcgagctgttcgacctcgatgccctgcgcgcc
gccaccgatgaatcggcccagcgcctgcgctggcgcggtgaaagcggcgaactgcatgtg
cgcatcagctcgccgcggcgcaagcttgggcggcggagcgcggccattgcccgccagccg
gttgatgagcgggtcgagcacagcctgcgcctggcgacccgggtcaaggactgcaacctg
gccgtgctggtgttgggcgaaaccggttcgggcaaggaggtgtttgcccgccagttgcat
gccatgagccagcgcagccgcaagccgtttgtggcgctgaactgcgccgccatccccgag
aacctgatcgagagcgagctgttcggctatgtcgccggagcctttaccggcgcctccagc
aagggcatgcagggcctgctgcaacaggctgatggcggtacgctgtttctcgatgagatt
ggcgatatgccattgaacctgcagacccgcttgctgcgtgtgctggccgaaggcgaggtg
gcgcccttgggcgcttcggcgcgccagcgggtggatatccaggtgatctgcgccactcac
cgcgacctgacggcaatggtcgcggccggcagttttcgcgaagacctgtactttcgtctg
gccaatgcccgtttcgaactgccgccattgcgtgagcgcagtgaccggctggcgctgatc
aaccagttgctgggcgaagaagccaagggctgtggcgttgatgtcggcttgagcgacggt
gcgctgcaggcgctgctcaattacccctggccgggcaatttgcgtcagctgcgccaggtc
ctgcgttatgcctgtgcgatctgttccggcagcaccttgcagcttgatgatttgccgctg
gagattcgtggcgggcaggtccaggcgcaggttcaggccagtgtcagcccggcgcgtcag
cagttgctcgatgcgctgattcgccaccgctggaaaccgggggaaaccgccaaggcctta
gggatttcgcgggcgacgttgtatcggcgggtgcatgagcaccggatcgagatgccgcgg
atgaccaaaagctga
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