Pseudomonas donghuensis: BV82_4064
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Entry
BV82_4064 CDS
T07361
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdw03009
]
BV82_4064 (rluC)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BV82_4064 (rluC)
Ribosome biogenesis [BR:
pdw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BV82_4064 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RepSA
Motif
Other DBs
NCBI-ProteinID:
KDN98172
LinkDB
All DBs
Position
complement(4145708..4146664)
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AA seq
318 aa
AA seq
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MTTNAPPTSGVQLIEVAPELAGQRIDNFLITALKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRVPPVRLPERDEPVPVAQGLLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LNFGVIEAFRQMRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA
LVRGHWATAKKQVNAPLLKSNLRSGERMVEVNDEGKEALTIFRVLRRFGEFATIVEARPI
TGRTHQIRVHALHAGHCIAGDSKYGDEDFTREIRDLGGKRLFLHAYALTVPLPDGGELKL
EAPVDEMWAKTVERLSAA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaatgcccctccgacctccggcgtccagctgatcgaggtcgcgccggaactt
gccggccaacgaatcgataatttcctcatcactgcactcaagggtgttcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgtgtgaacaagggccggatcaagcccgag
tacaagttgcaggccggtgacatcgtgcgcgtgccgcccgttcgtctgcccgaacgtgac
gaaccggtgccggtggcccagggtttgcttcagcgccttgaagcggcgattgtctacgaa
gacaaggctctgattgtgctcaacaaaccggccggtattgccgtgcacggtggtagtggc
ctgaatttcggtgtgatcgaagcctttcgtcagatgcgtcccgacgccaaggagctggag
ctggtccaccgcctcgatcgcgatacctctggcctgttgatgattgccaagaagcgcagc
atgttgcgtcacctgcacgccgccctgcgtggcgatggcgtcgacaagcgctacatggcg
ctggttcgcggtcactgggccaccgccaagaagcaggtcaatgcgcccttgctcaagagc
aacctgcgctccggcgagcgcatggtcgaggtcaatgacgagggcaaggaggcgctgacg
atcttccgtgtgctgcgccgtttcggcgagttcgccacgatcgtcgaggcgcggccgatc
actgggcgtacccaccagattcgcgtgcatgccctgcatgccgggcattgcattgccggc
gacagcaagtatggcgatgaagatttcacccgcgagattcgcgaccttggtggcaagcgc
ctgttcctgcatgcctacgccctgaccgtgccgttgcccgatggcggcgagctcaagctt
gaggcgccggtggatgaaatgtgggccaagaccgtggagcgcctgagtgcagcgtga
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